K31614

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased length (PATO:0000574) (Seed::Shape::short) increased width (PATO:0000600) (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31614

Determination of introduced cDNA(s)

J013063G02 - Rice Full-length cDNAs - Original: J013063G02

full reading [+] show sequence

TGGTCTGGTA TTTTGAAACG GGGAGGCGGA ATGCTCGACC GATCCCTCAG 
GCCGCCGCAG CCGCAGCAGG CGGCGGCGGA GGCGGAGGCG GGCCCCGGCG 
GTGGCGAGGG AGGGGGGAAC GTGGATCGGG TGCTGTTCAA GAACCTCGTC 
GAGATGGTGC CGCTCGTGGA GTCGCTCATG GACCGGAGGT CGAACCCGTC 
CTACTCGAGG CGCGCGTCGA TGGTGTACAC GCCGGCGCCG GCGAAGAAGG 
GTTCTGATTT GAAGAGTGTG AAGTCGCCGC AAAGTGTGTC GGTGAAAAAA 
CGGAGGGATC CTGGAGAGAC GGGCAAGAAG AGCACCGCCG ACTCCAATGG 
TGAGAATGGC GCGGTTGCGC CAGTCGGTCT GTTGGGGGGA GAAAATAAAC 
CCAAGGATAA GGATGAGATC GTTTTGCTGC GTGAGCAGAT CGAAGAGTTG 
CAAAAGACGC TGCTTGAGAA AGAGGAAGCA CTGAAATCCG CGGAGAGTTT 
GGTGGGTGAG ATGAATACAT TATATTCGAC AGTAGATGAG CTGAGACGCC 
AGGTTGCTGA CAAGGAAGGT TTGATCAAAT CTATCAATTC TCAGCTGCAC 
AATGCGAAGA TTATGCTTGC AGACAAGCAA GCATCATTAG AGAAATTAGA 
ATGGGAGGTG AAGACGTCAA ATAAGAAAGT AGAAGATCTT CAAGGGGATG 
TCTCCAATAT GGAGTTTGAG ATAGGTTCGT TGATGGCATT ATTCGAAAAA 
ATTTCGGAGA ATGTTTCAGG TGAACTCCAA GATGGTAGCT TGCCATCATC 
TTTTGAATTG GAAGCACTTC AATCAACTAG CGAAATCGAC AAGATTGAGG 
TTGAGAAGAT AGAGCAAGAA GCGGTTACAT ATGCCGAAGC TCTTGCTGCA 
GCAAGAGAGA ACCCAAACGA GGAGCAGCTG AATATAGCTG CGGAAGCACG 
GTTAAGGCTG CAGGTCCTTG TGCTATGATG CGCCAAGTGC ATATTGTAGT 
GTATGTGTAT GATAATGTCG AATCGCTGAT GTAATTATGT GTGCGTGCTT 
GATCGAGTTT ATTTCATGTG AGACCGTACT GACGGTAATC GATCAAGCAC 
CAGATACTGG ACACTTATTT AATTGGAGAT GATGTTTATT C

Gene models with high sequence identity

AT5G08120.1 [+] show detail - movement protein binding protein 2C
E-value: 3e-25; Score: 113.00

InterPro Scan Digest

Program	Description	E-value
Coil	coiled-coil	0
Coil	coiled-coil	0
Coil	coiled-coil	0
HMMPfam	Vps5 C-terminal	4e-06

See the detailed result >

AT5G08120.1

Model type: Protein coding
Short Description: movement protein binding protein 2C
Curator Summary: Microtubule-associated and viral movement protein binding protein. Negatively regulates KN1 association to plasmodesmata and, consequently, cell-to-cell transport. Involved in the alignment of cortical microtubules, the patterning of stomata and in restricting tobamoviral infections.
Computational Description: movement protein binding protein 2C (MPB2C); Has 5726 Blast hits to 4344 proteins in 670 species: Archae - 77; Bacteria - 646; Metazoa - 3260; Fungi - 443; Plants - 256; Viruses - 12; Other Eukaryotes - 1032 (source: NCBI BLink).
Link: InterPro Scan - TAIR