K31628

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased length (PATO:0000574) (Seed::Shape::short) low saturation (PATO:0000328) (Seed::Color::pale)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31628

Determination of introduced cDNA(s)

J023130B22 - Rice Full-length cDNAs - Original: J023130B22

full reading [+] show sequence

GGAGGTTGGG CTAGGTGCGG TGCAGACGGT GTCGGGGGGT GCAGGGCAGG 
CGCAAAAGGA ATTACGGAAT TGCCCCAACC AAGGAGGAGA CGGAGGGGAG 
GGCAAGAAGA AGAAGGACGG TGCAGAGGAA AGGAAAGGAT TGGAATTCCA 
GGGGCGACGA CATGGCCGCC GTGCAGGGGC AGGGGCAGGG GAAGCTCCTG 
TACATTGTGG TGGTCGACGA CGATGGCGCC ACCTTCCGCT ACACGCGCTC 
CCTCCTCCAC AGCACTCTGC AGCTGATGGG ATGCAAGCCG CGCCATGCCT 
TCGAGATCAG CGGCAGGGTG TTCGACGAGA TCCGAGGTCA CATGGGCGGT 
GACATGGCCA TGGGCGGCGG CGGTGGCGTG CAGCGCTACG AGCTGGCCGC 
CGACGCGGAA GCCGCCAGCC CCAGGCAGTT CCAGTTCGAG CTCTACAAGC 
GCCGCACCAC CCTTCTCATC CCTCGCCCGC TCTTCCTCCG CCTCGTCTGC 
CACGCCCTCG CCCTCTACAA GTATGTCGCC CCCGACCAGC GCTCTGATCT 
CCACCGAGCC TGCAGGATCC GGGAAAGGAA GGAATCAGTC ACCATTCTTC 
TCTGCGGAAC CAGCGGCTGC GGCAAGTCTA CTCTTTCCAC CTTGCTGGGG 
AGCAGATTAG GAATCACTAC TGTAGTCTCC ACCGATTCCA TTCGCCACAT 
GATGCGGAGC TTTGTTGAAG AGAAACCAAA TCCCCTTCTC TGGGCATTTA 
CCTATCATGC AGGCGAATGG CCTCGACCCA GTAGCGGTCG CTGATGGTAA 
AGGTAGGCGC AAGGCAAAAA AACGCTCAGG CATCTCAACG ACCTCAACCA 
TTGATTTTGA TAAAACCAGG CCTCTCAATG ACCAACCTGA CGGCAAACCA 
ATTGGGAAGA AGCAGATGGC CATAGAAGGC TACAAAGCCA CAAAGTGAGA 
TGGTCATTGA TAGTTTGGAT CGGTTGATTA CTGCCTGGGA GGATCGCAAG 
GAATCAGTTG TTGTTGAGGG TGTTCACCTA AGCCTTAATT TTGTGATGGG 
GCTAATGAGG AAACATCCTT CTATAATACC TTTTATGATC TACATATCCG 
ATGAGGGCAA GCACACCGAG AGGTTTGCCG TACGTGCAAA GTACATGACA 
CTTGACCCAA CAAAAAATAA GTACGTCAAA TACATCAGCA ACATTAGAAC 
TATCCAAGAG TACCTCTGCA GCCGAGCCGA CAAGTACCTA GTTCCCAAGG 
TGAACAACAC TAATGTTGAT CGGAGTGTGG CTTCTATCCA TGCCACTGTC 
TTTAGCTGCC TCCGTAGGAG AGCTGCTGGT GATCAGTTAT ATGACCCTGC 
TACAAACACA GTGGCAGTTG TAAACGAGGA ATACAAAAAC CAATGTGTGG 
CCAACTCCAT GAGTTCCAAG GGGATGTTCA AATTGATTCA AAGGTTAGGA 
TCCTCAAGAA AGCTCATGGC CATTGTCAAT GTGGATGGAT CTGTTTCAAA 
GGCTTGGCCG GTTGAGTCCA GCAGCGGGGA TGGAAAAGGC GGTTCGGAAA 
ATGGCAGTAA GAAATATGTA GGCGATCCAA TATACGGGCC TCTAAATATT 
GGAAGGGCAG AGTCAGTCAA TCTCCAGTTT GGCGCTTTCG GAATAAGTGC 
CTGGCCTACT GATGCAGGCT GTACAAGTCA AGCTGGAAGT GTCAACGAGT 
CATGGGACAA TGCTAATGAA GGCACTGGAA GCCATGTTCC TTCTTCTTCT 
GGTTCTCCTA AGAAGTTGGA TGGACATTGT AAAGAGATTA AAGAATCAGC 
AGCGGCATCT GGAAGTGATG ATGACGAAGA AGAAGAAGAA GAAGCGGCTG 
ATGTTCCACC TAATTCAGGG AGTGAGGAGG ACCTAAGTGA AGAAGACATA 
AGGGCGATCC ATGAGGAGAT GGAAGGTTCC GTCGATGAAG ATTGCAATAG 
GTCTGATGAG GAATATGATG ACCTGGCCAT GCGTGATTGC ATGGAGAATG 
GTTTTTTGAC CGACGATGGT GTTGTTCACA CCGTATTTGA TGGCAACGGA 
CAGAAGCACA GCACATTGAG AAAGCGTCAA GTTAATTTGC GTACCCTATC 
AAAGATCGAC TTAGACTCTC CTGACACTGC ACGCTCTTCT TCTGCTCTTC 
CTATTAGCGC AAGCAGCAAG CGAAATGGCA CAAGGAGGTG GAAGCGGTCC 
TTGAGTGAAT CATTTCGTTC ACGGCCACGG AGTGCTCCAT CTTTAGTGGA 
ATTGACGCCA AAGCACAAGG GCTCAGCCGT TCCAGAGGTG GCTCCCGACA 
AGTAGAACTG CATATAACCA GGGTATATCT GCCTAACTAG TGTTTTGCAG 
GAGGCCTAGA CTTAACAGAT GAATAACCGA TTTTTTTTTC TTTCTTTCTG 
GTCTTTAACC CTCATGCCTT TTTTTTCCTG GACTTGGAGA GGATGCAGAT 
AAAAATTCAC ACAGCGTGAT TCTTTTGGGA GTTATGTTTT CTGTTTGCAT 
ATGCCTAAGC TGTAAATGAT GAAAATACAG TATATGTACT GTCTGAACCC 
TCCGAGATGT AGAGAAGTTT GAGGCAATGT GTTGTTCTTA TCAATGCTGC

Gene models with high sequence identity

AT5G60760.1 [+] show detail - P-loop containing nucleoside triphosphate hydrolases superfamily protein
E-value: 1e-155; Score: 174.00

InterPro Scan Digest

Program	Description	E-value
superfamily	P-loop containing nucleoside triphosphate hyd	2.5e-07
Coil	coiled-coil	0

See the detailed result >

AT5G60760.1

Model type: Protein coding
Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G45090.1); Has 1216 Blast hits to 969 proteins in 195 species: Archae - 93; Bacteria - 85; Metazoa - 220; Fungi - 67; Plants - 127; Viruses - 43; Other Eukaryotes - 581 (source: NCBI BLink).
Link: InterPro Scan - TAIR