K31630

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31630

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31630

Determination of introduced cDNA(s)

J013086I05 - Rice Full-length cDNAs - Original: J013086I05

full reading [+] show sequence

GGTTCGCCAC CATTACACCA TTCCATTCCA GTGGTAGAAG ATCCGAGATC 
GAGGAGGAGG TGAGGAGAGG AGCAAGAAGA AGAAGAAGAA GAAGAAGAAG 
AAGATGGGCA TGGAGAGCGG AGATGCCCAA CTGCCGCTGC TCCACCACCA 
GGCTTCCGCA TCCAATCAGC ACTATACCAA GCCCCCCTTC AACTGGAAGG 
CTCCTGCTCT TATCTTGGCC TTTGAATTCT TGGAGAGCAT TGCCTATGCT 
GGCATCTCCC TCAACTTGGT CGTTTATCTT GGAACCGTCC TCCATGGAAC 
TACCGCCTCT AACGCAGCCA ATGTTGATAC ATGGAACGGA ACCACTTTTC 
TTACACCGGT GCTTGGAGCC TTCTTGGCTG ATACATACTG GGGAAAGTAC 
AAGACCATTG CCATCTCTAC AGTTTTCTAT CTTATTGGGT TGCTTGTAAT 
TACCGCCTCT GCTGTCATCC CATCACTACA ACCTGCTCCA TGCAATGGGA 
GCTCATGTCC TCCTGCAACA GGGTTTCAGT ATTTTGTCTT CTTCACCGCG 
CTCTACCTTA TTTCGGTTGG CACCGGGGGT GTCAAATCAG CATTACTCCC 
CTTTGGAGCT GACCAGTACA ACGATTCAAA CCTCGAAGAG AGTAAAAAGA 
AGCAATCTTT CTTTAGCTTG TTCTTCATTG CTATCAACCT TGGAGTGTTC 
ATTTCGGGCA CTGTCGTCGT TTGGATACAG CAAAATGTTG CTTGGTCTCT 
CGGATTCGGC ATCTCCTCAA TATGCCTTGT TGTTGCCACA GTTGCCTTTT 
TGGCAGGAAC ACCAGTGTAC AAGGTCCAGC TTCCCAGTGG AAGCCCACTC 
AAGAGTGTTG TAATGGTTTT TGTTGCCTCT TTTAAGAAGA GAAAACTGGA 
GGTTCCTGCC GATAACGCAC TCCTGTATGA AGGGGATGAT GCTGATTTAA 
GCAATGGACA ATCAGTCAAA CTAGCACATA CTGATGGTTT CAGGTGGTTA 
GATAAGGCGG CAGTGGTTTT TGAGGAGGTG GAAGAGATAA ATAAGGATGA 
GGGTGGGGGT GGAGGGTGGC TGCAGTGTTC GGTAACGCAG GTGGAGGAAG 
TGAAGATTCT GCTGCGGATG CTGCCGATAT GGGTGACCAG CGTGCTGTAC 
GCGGCTTCCT TGGGTCAGAC GGCCACCACC TTCGTGCAGC AGGGGAATGC 
CATGAACACC AAGATCGGAT CCTTCTCTGT CCCGGCGGCA TCCCTCAACT 
CCGCCGAGGT CATCTTCATG ATGATCTGGG TGGTGTTCCA GGACACGGTG 
GTCGTCCCGA TCGCCAGGCG CTACACCGGG AACCCCGCGG GGCTGACGCA 
GCTGCAGCGG ATGGGCGTGG GGCGGTTGCT GGCGGTGCCG GCGCTGGCGG 
TGGCGGCCGT GCTGGAGACG TGGCGGCTGC GCAGCGTCAG GGACGGCGGC 
AACCTGAGCA TCGCGTGGCA GCTGCCGCAG TTCGTCATCC TGGCCTGCTC 
CGACGTCTTC TGCGGCATCG CTCAGCTGGA ATTCTTCTAC TCGGAGGCCC 
CCGTGTCGAT GCGGAGCCTC TGCTCGGCCT TCTCCTTCCT GGCGCTCTCG 
CTGGGCTACT ACGTCAACTC CCTCGTCGTC TCCATCGTCG CCGTCGTCAC 
CACCACCTCG AACAAGGGCT GGCTCCCCGC CGACCTCAAC GACGGCCATC 
TGGACTACTA TTTCTGGCTC TGGACGGGGA TCAGCGCCAT CAACTTTGTG 
GTGTACGCCG CCTTTGCCAA GAATTATACC GTCAAGAGAC TCGCCGTCCC 
GCACTCGCAC TGATCGTCTC CCTCATCCAC CCAACACTGC CTTGTATTAT 
TCCAATCAAC CATTCTTGTA TTATTATTCC

Gene models with high sequence identity

AT2G02040.1 [+] show detail - peptide transporter 2
E-value: 2e-124; Score: 443.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Major facilitator superfamily, general substrate transporter	0.00000000000011
HMMPfam	Oligopeptide transporter	3e-78
HMMPanther	OLIGOPEPTIDE TRANSPORTER-RELATED	3.4e-270
HMMPanther	OLIGOPEPTIDE TRANSPORTER-RELATED	3.4e-270
PatternScan	PTR2 family proton/oligopeptide symporter, conserved site	0

See the detailed result >

AT2G02040.1

Model type: Protein coding
Short Description: peptide transporter 2
Curator Summary: Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.
Computational Description: peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink).
Link: InterPro Scan - TAIR