K31818

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31818

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased width (PATO:0000600)
    (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31818

Determination of introduced cDNA(s)

  • J033003G06 - Rice Full-length cDNAs - Original: J033003G06

    full reading [+] show sequence

    Nucleotide sequence: J033003G06 - full reading 
    GGCACTCCTC CCGCCGCCGC CTCCGCCTGC CTCGGAAGTC ACGCCCCTCC 
    CGCCGCAGCG GCAGAGAGAG AGAGAGAGAG ATGGGCTTCC TGTCCTTCGC 
    CGGGAGGGTC CTCTTCGCCG CCGCCTTCCT CCTCTCCGCC TACCAAGAGT 
    TTAGTGAATT TGGAGTTGAT GGTGGGCCGG CCGCAAAAGC TCTCCAGCCG 
    AAGTTCAACA CTATTGTTGC AAATATTTCT ACCCGTACTG GATTAGTGGT 
    GCCTCATATT GAATTAAAGC ATATTGTTGC TGCAATGATT TCTTTGAAGG 
    GTCTTGGAGG TCTCCTCTTT ATCCTCAGCA GTTCATTGGG TGCTTATCTC 
    TTGTTGTTTC ACCTTGCTTT TATTACACCT GTTGTCCACG ACTTCTACAA 
    CTATGACATT GAGAGTGCAG AGTTTGTACA GCTCTTCACC AAGTTTGCAC 
    AGAATTGCGC ACTTGTTGGG GCGCTCCTCT TCTTCCTTGC CATGAAGAAC 
    TCCATCCCTA AGAGGCAGCC CAACAGGAAG AAGGCCCCTA AACCAAAGTC 
    GACCTAAAGA TTCTGAACGT CTGAAGCTAC ATTGTTTGCC TAATTGCTGG 
    TGCCAGGGGA TGGCTCTCAT CTGGGAGAAA CTCCACAGCT AGCATTTGAG 
    GATATGGCAT TTGTGCTTGT GCATGCTTTA ATTCTGAAAG CATCCCTTGA 
    TCCTGACCCA TTTTTACCGG ATTTTTTTTA AGGGCGCCTC CCTGATTACA 
    TTCTAATGTC TGATTAGACG ACCAGATTGT ACCAACATGT ACTCCCTTTT 
    GGTTCTTGAT TCAGTTTCTT AGGAAGCAAT CGTTATTTAT GTACACTCCA 
    TTAATTTGCT GGGAAACATC ATCTTCTTGG C

    Gene models with high sequence identity

    1. AT4G14420.1 [+] show detail - HR-like lesion-inducing protein-related
      E-value: 7e-38; Score: 154.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G14420.1

    Model type
    Protein coding
    Short Description
    HR-like lesion-inducing protein-related
    Computational Description
    HR-like lesion-inducing protein-related; LOCATED IN: endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: HR-like lesion-inducer (InterPro:IPR008637); BEST Arabidopsis thaliana protein match is: HR-like lesion-inducing protein-related (TAIR:AT1G04340.1); Has 163 Blast hits to 163 proteins in 27 species: Archae - 0; Bacteria - 10; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR