K31821

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31821

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased width (PATO:0000600)
    (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31821

Determination of introduced cDNA(s)

  • J013034B14 - Rice Full-length cDNAs - Original: J013034B14

    full reading [+] show sequence

    Nucleotide sequence: J013034B14 - full reading 
    GAGCCGCGCG TGCGTGCGAA TCATTCCGGC CGCAGCCTAC CTCTGCCTCT 
    CTCCTCTCCT CGCGGCGTCG GCAGCGAGTT CTCCTCGGAT CGGGAGTGGA 
    GGAGAAGCGG GAGGAGGAGG AGGAGGAGGG ATGAGTCTCT TCGGGCTCGG 
    CCGGAATCAG AAGACGTTCC GTCCCAAGAA GAGTGCTCCT TCAGGAAGCA 
    AGGGTGCACA GCTTCGGAAG CACATAGATG CCACTCTTGG CAGTGGAAAC 
    CTTAGGGAAG CTGTAAGGTT GCCGCCTGGA GAAGATATCA ATGAATGGCT 
    GGCTGTGAAT ACTGTGGATT TCTTTAACCA AGTTAACCTG CTGTACGGCA 
    CACTCGCTGA GTTCTGCACA CCTGAGAGCT GCCCAACAAT GACTGCTGGC 
    CCAAAGTATG AGTACAGATG GGCTGATGGT GTACAGATAA AGAAGCCGAT 
    AGAAGTATCA GCACCAAAAT ATGTGGAGTA CCTAATGGAC TGGATTGAAG 
    GCCAACTTGA TGATGAATCT ATATTTCCCC AAAAGCTTGG CACACCATTC 
    CCGCCAAACT TCAAGGAGGT TGTAAAGACA ATTTTCAAGC GCTTGTTTCG 
    TGTTTATGCC CACATATATC ACTCCCATTT TCAGAAGATT GTCAGCCTCA 
    AGGAGGAGGC CCATCTTAAC ACGTGCTTCA AGCACTTCAT CCTGTTTACA 
    ACTGAATTTG GCCTGATTGA CAAGAAGGAG CTGGCTCCAC TCCAGGAGCT 
    CATCGAATCG ATTATTCCAT ACTGAGAAGA ATACAGGGAC GGAACGGAGC 
    GTGGATAACG AGTTCTTTAC ATGGACGATC GAGGAATCAG GCTACTTGCA 
    ACACTATTTT ACTGGCATAG AGCTTACTGT TCCAGATATC AGACATAAAA 
    AAGGACATTT GACATTGCTA ATGCTATGTT TTTTGTGTAC TGATGTTCGT 
    TCGTCCTGAT TCAGTATTAC CTTGTGTAAG CGTGCTTGTA ATGTAATAAC 
    AGGATTGGTG GATTGGGATA TATTGCAAAG AACGATCTAT TAATCCAATC 
    GTGAGTTGCA ATTGTTGCTT C

    Gene models with high sequence identity

    1. AT5G45550.1 [+] show detail - Mob1/phocein family protein
      E-value: 5e-113; Score: 404.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther MPS ONE BINDER KINASE ACTIVATOR-LIKE 1 (MOB1 1.1e-145
    HMMPanther Mob1/phocein 1.1e-145
    superfamily Mob1/phocein 2.2e-78
    HMMPfam Mob1/phocein 3.9e-77
    Gene3D Mob1/phocein 7.8e-80

    See the detailed result >

    AT5G45550.1

    Model type
    Protein coding
    Short Description
    Mob1/phocein family protein
    Computational Description
    Mob1/phocein family protein; CONTAINS InterPro DOMAIN/s: Mob1/phocein (InterPro:IPR005301); BEST Arabidopsis thaliana protein match is: Mob1/phocein family protein (TAIR:AT4G19045.1); Has 1269 Blast hits to 1261 proteins in 207 species: Archae - 0; Bacteria - 0; Metazoa - 709; Fungi - 290; Plants - 115; Viruses - 0; Other Eukaryotes - 155 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR