K31828

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased size (PATO:0000586) (Seed::Shape::large) increased length (PATO:0000573) (Seed::Shape::long) increased width (PATO:0000600) (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31828

Determination of introduced cDNA(s)

J033073B17 - Rice Full-length cDNAs - Original: J033073B17

full reading [+] show sequence

GGACGGTTTC AGGACTCGGC CGCATCCCTC CTCGCCCACT CTCCCTCACG 
GGACACCTGC GGGGCTCGCC GACAACATGA ACAAGAACGC CGCACCGGAA 
GACGTCGAGA GCGGCGAGCA CGAGCGGACA GGGACGGTAT GGACGGCGAC 
GGCGCACATT GTTACGGCGG TGATCGGCTC CGGCGTGCTG GCGCTGGCGT 
GGAGCGTGGC GCAGCTGGGT TGGGTGGCCG GGCCGCTCGC CCTCGCCGGC 
TTCGCCTGCG TCACCTACTA CACCTCCACT CTGCTCGCCA ACGCCTACCG 
CGCGCCGCAC CCCGTCACCG GCACCAGGAA CCGCACATAC ATGGACGCCG 
TCAGATCATA CCTCAGTCCT AGAGAGGTGT TCATGTGCGG AATCGCGCAG 
TACGTCAACC TGTGGGGCAC CATGGTCGGC TACACAATCA CCGCAACCAT 
AAGCATGGTC GCGATCAGGA GGTCGGATTG CATCCATCGG AACGGCGCCG 
GCGCCGCCGC GCGGTGCGAC AACACGTCGG CGACGGTGCT CATGCTGGCG 
TTCAGCATCG TGCAGGTGGT GCTGTCCCAG TTCCCGGGCC TGGAGCACAT 
CACCTGGCTG TCCGTCGTCG CCGCCGTCAT GTCGTTCGCC TACTCCTTCA 
TCGGCCTCGG CCTGTCCGTG GCGGAGTGGG TGTCGCACGG CGGCCACCTC 
AGCGGCAGGA TCCAGGGCGC CACCGCGGCG TCCTCCAGCA AGAAGCTCTG 
GAACGTACTG CTCGCACTGG GGAACATCGC CTTCGCCTAC ACCTTTGCAG 
AAGTGCTAAT TGAGATCCAG GACACACTGA AACCGTCACC ACCGGAGAAC 
AAGACCATGA AGAAGGCAGC GATGTACGGG ATTGGAGCCA CCACCATCTT 
CTACATCTCC GTTGGCTGCG CCGGGTACGC CGCGTTCGGT TCAGATGCTC 
CGGGCAACAT CCTGACGGCG TCCGGTATGG GGCCCTTCTG GCTCGTCGAC 
ATTGCCAACA TGTGCCTCAT CCTCCATCTC ATCGGAGCAT ATCAGGTTTA 
TGCACAGCCC ATATTTGCGA CAATGGAGAG ATGGATCTCC TCCCGGTGGC 
CGGAGGCCAA GTTCATCAAC AGCGAGTACA CCGTAAACGT GCCGCTGATC 
CAGCGAGGAT CGGTGACCGT GGCGCCGTAC AAGCTCGTCC TCCGGACCGT 
CGTAGTCATC GCGACGACGG TGGTGGCGAT GATGATACCG TTCTTCAACG 
CGGTGCTGGG GCTCCTCGGC GCCTTCAGCT TCTGGCCACT GACTGTTTAC 
TTCCCCATCA GCATGCACAT TGCGCAGGAG AAGATCACCA GGGGAGGGAG 
GTGGTATCTC CTGCAAGGCC TGAGCATGGT GTGCTTGATG ATCTCGGTGG 
CAGTGGGCAT TGGCTCTGTC ACTGACATTG TTGATAGCCT GAAGGTTGCA 
ACCCCTTTCA AAACTGTCAG CTAAAAGCAG TGCTGCAGTA TATTGTAGAA 
CAGTGACAAA CAGAAAACAG CTACGAGTTG TACAACAATG TAGGATTCTG 
GACTCTGATT CTGTGTCTCT GTGTATCAAT TTTCTCGGAT ATCCGGCCGG 
TTCCTGAAAG ATTTGGAACT CTGAACTTTG CTGGATCAGC TATATTGACA 
CATTAGGTTG TTCCTATCTG ATTAAACAGG TCGGAACTTG GAACATAGCA 
GAAAGAGGTT GGAATATGTA GTAGTATTGG AATAACCTGT ACAACGGCCT 
TTGCCTTTTA GT

Gene models with high sequence identity

AT1G10010.1 [+] show detail - amino acid permease 8
E-value: 3e-135; Score: 479.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	AMINO ACID TRANSPORTER	3e-81
HMMPfam	Amino acid transporter, transmembrane	5.6e-96

See the detailed result >

AT1G10010.1

Model type: Protein coding
Short Description: amino acid permease 8
Curator Summary: Encodes a high affinity amino acid transporter that is probably responsible for import of organic nitrogen into developing seeds. One of eight gene family members that encode amino acid permeases. Most closely related to AAP1 (75%) identity.
Computational Description: amino acid permease 8 (AAP8); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 1 (TAIR:AT1G58360.1); Has 2959 Blast hits to 2943 proteins in 246 species: Archae - 0; Bacteria - 24; Metazoa - 771; Fungi - 529; Plants - 1378; Viruses - 0; Other Eukaryotes - 257 (source: NCBI BLink).
Link: InterPro Scan - TAIR