K31908

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31908

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31908

Determination of introduced cDNA(s)

  • J013049M19 - Rice Full-length cDNAs - Original: J013049M19

    full reading [+] show sequence

    Nucleotide sequence: J013049M19 - full reading 
    GGCCGTGCAC CATGCTCCCC TCCGGCCTCG CAGTCGCTCC GCCTCCCATA 
    AGCCTCCACG CCGCCGCCTC CCGCACGGGC CGACAGCGGT ATGCACCCGT 
    CGACCGGCGT GCTTCGATGG GCCGGAGCAA TCCGCCGCGG CCCACCCGCG 
    CCGCGTGGTG GCGGACCCGA CGCCGCGAAG GCGTCCCTCC CCTCCCCTCC 
    CCGCCGACTG GTACGACACC GCCGCAGTCA TCGTCGCCGG CGGCCGGAGC 
    AGCTAGGTTC GGTGGTAGAG AGAGGAGGAA GGGAGAGAAG AGGGGAAAGA 
    GCCTGAGGAG GAGGAGGCCT CGGTAGGCAT CCCTAACGCC GAAGGGGGAG 
    GAGGCGACGA GGCCTTCCGC CAAGTGAAGT CATCCGAGGA GCCATCCGCC 
    GCCCGGAAAA GTCCGGTGGC GAAGAAGCCG AGCCGGCCGC ATGGGGGGAG 
    TGGGGGGCCC CAACCGGCGT GTTCCCCGCC GACATCTCCC CGCCCGCGGC 
    CGCGAATCAT GTTGCTCTCT CCCTGTCACT TCACAACACG CGGAGGCAGC 
    AGCGGCCGGT GGTGCGGGGC TGCGGGCTTC GTCTCGGCGG GACGGACGGC 
    AGCGGCTGGG TAGCGTCGCG AGCTTGGACC CCCCGGCGGC GGCGGCGTGG 
    GGAGGGCGGT GAGATCGAGT CCTGCGACGT CGGGGTCGGG CTGTGGCTGG 
    GAAAGTGCGA CGAGAACGAG CACGCCCGGT GGCGGTTACT GGAGGAGCAC 
    GTCGAGGTCG GGCCCTTGGC GGCGGCAAGG TCAAGCCTTG GCTTCCTGTA 
    ATCAAAGGTG CCTCATTGTA CTTGATAATG TGTGGACTGT ATCAACATGG 
    AATGTTGTTA GACATGCTTT ACAAGAGGAT TGCTGTAGTA GAATAGTAGT 
    AACAACAGAA ATTAACGATG TGGCTCAGGC ATGGAGTTTT TACAAGTCTC 
    AACATAATGC ATCTCACGTG ATCAAGAAGC ATATTTTGAA GATGGAACCG 
    CTTAATGACG ATTTCTCAAG AGATTTACTT GTTAGTAGAG TTTTTGGTGA 
    TAAAGACAAA TGTCCTGAAG AACTCAATGA AGTTTCATAT GAGATAGCAC 
    GAAAATGTGG CGGTTTGCCA CTAGCAACTA TCGCTGCAGC CAGTCTTTTA 
    TTGAGTCGGC CAGACAAACC AGATGAATGG ATCTATGTAC AGAAGTCGTT 
    GATTCCAGAT TTGAGGATAC AACCTACTTC CGAAGGAATG GCACAACTAC 
    TGAACAATAG CTTCAACAAT CTTCCTCATC ATTTGAAAGC ATGCATGCTG 
    TATCTGAGTA TATATAAAGA GGATCACATA ATCAATCCGG ACGATCTGGT 
    TAAGCAATGG GTAGCTGAAG ATTTTGTAAG TGCGACGGAA GGGAAAAGTT 
    TGGATGAAGC TGCAAGGAAT CATTTTTATG AGCTTGTCCA TAGGGGAATA 
    CTTGAAACTG AACATATCAG CTGTAGTGAT GAGGTTGTAT CTTGCACAGT 
    GCATGACATG GTTCTTAACT TTATCAAACG CAAGGCAATG GAAGAGAATT 
    TTGTCACTGC AATTGATCAT TCTCAGTCTG GTATAAGACT AGCAGACAAA 
    GTTCGACGAC TCTCTCTCCA TTTCGGATAT TCAAAAGATG CAAAGGCACC 
    AGCATGTATT AGATTGTCAC AACTACGATC ACTTGTGTTT TCTGGATTTT 
    GGAAGTGCGG GCCTTCCATT TCGGAGTTTC ATCTTCTTCG AGTTCTATTC 
    CTTCATGGTA AACATGGCGA ATTTCTTGAC CTCACTAGAA TTCGTGAACT 
    GTTTCTACTG ACTTATTTGC AGATTGAAGG TAATGTTTGC ATAGACTTAC 
    CATCAGAGCT CCAAGGACTG AAGTATATCA GGACTCTGCA TATTGGTGCA 
    ATGGTGACCT TTTTGAGATC AGAAGTTGTT CATCTTCCGC CGTTGCTGCA 
    CTTCAGACTT CCACCCAATC TAGGGTACTT TGTTGACGCA GGGAGTGTAC 
    AGAGTATTGA AGAACTGACC AATTTGCAGG ATCTTCAACT CGCATGTCCT 
    CAGATAGCCA CTTCTGACCA TATTAAGCAC AACATGAAAC TGTTGGGTTC 
    AATTATTGGG ATACTTAAGA GCCTCAAATC TCTAACAGTT GTTCCTGTCT 
    GCTTCTCTGA AGATTCTAAT GATAACGAAA ATTCAAGCAT TGCCATTTTC 
    TTGGATTTCT TAGATAAAGT TCCCCCCCCT TGTAGCCTTC TGCAGAGGCT 
    TGAGTTGTTT CCACGTGTTT GCGTCTTCCA TAGACTTCCC AGTTGGATCA 
    TAACTATTGA GAAACTCTGT ATTTTGAAAG TAGCAGTCAT GGAACTCCTG 
    AGGAAAGACA TTGAGACTCT CTCAATGCTG AATGCCCTCA CTGTTTTCTC 
    G

    Gene models with high sequence identity

    1. AT3G46730.1 [+] show detail - NB-ARC domain-containing disease resistance protein
      E-value: 2e-26; Score: 118.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Outer arm dynein light chain 1 6.2e-09
    HMMPfam NB-ARC 2.1e-32

    See the detailed result >

    AT3G46730.1

    Model type
    Protein coding
    Short Description
    NB-ARC domain-containing disease resistance protein
    Computational Description
    NB-ARC domain-containing disease resistance protein; FUNCTIONS IN: ATP binding; INVOLVED IN: defense response, apoptosis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: NB-ARC domain-containing disease resistance protein (TAIR:AT3G46530.1); Has 14658 Blast hits to 14197 proteins in 483 species: Archae - 6; Bacteria - 489; Metazoa - 440; Fungi - 102; Plants - 13534; Viruses - 0; Other Eukaryotes - 87 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR