K31919

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K31919

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased width (PATO:0000600)
    (Seed::Shape::wide)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K31919

Determination of introduced cDNA(s)

  • J023078E19 - Rice Full-length cDNAs - Original: J023078E19

    full reading [+] show sequence

    Nucleotide sequence: J023078E19 - full reading 
    GACACTCTCT GCTTCTCTAG CATCACAAGG TAGACGATGG CTAAGGGTCA 
    CGTCCTCGTG CTCCCGATGC CATGCCAGGG CCACGTCATC CCGTTCATGG 
    AGCTCTCCCA CCGCCTCGCC GACGAGGGCT TCGAGGTCAC CTTCGTCAAC 
    ACGGAGGTGG ACCACGCGCT GGTGGTGGCC GCGCTGCCGC CGGGCGGCGC 
    CGCGGAGCTC CGGCAGCGGG GGATCCACCT CACCGCCATC CCCGACGGCC 
    TCGCCGAAGA CGAGGACCGC AAGGACCTCA ACAAGCTCAT CGACGCCTAC 
    TCGCGCCACA TGCCGGGCCA CTTTGAGCGG CTCATCGGGG AGATCGAGGC 
    CGGCGGCGGG AGGCCCAAGG TGCGGTGGCT CGTCGGAGAC GTCAACATGG 
    GGTGGTCGTT CGCCGTCGCC AGGAGGCTCG GCATCCGCGT CGTCTACTTC 
    TCGCCGGCGT CCACGGCGTG CATCGCCTTC ATGCGCAAGA TCCCCAAGCT 
    GATCGAGGAC GGCGTCCTCA ACGAGAAGGG GTGGCCGGAG CGGCAGGAGA 
    CGCTGCAGCT GGCGCCGGGG ATGCCGCCGC TGCACACGTC GCTGCTGTCG 
    TGGAACAACG CCGGCGCGGC GGAAGGGCAG CACATCATCT TCGACCTCGT 
    CTGCCGGAAC AACAAGTTCA ACGACGACCT CGCCGAGATG ACCATCTGCA 
    ACTCCTTCCA CGAGGCCGAG CCCGCCGTCT TCAAGCTCTT CCCGGACCTC 
    CTCCCCATCG GCCCGCTCGT CGCCGACCGC GAGCTCCGCC GCCCCGTCGG 
    CCACTTCTTG CCGGAGGACG CCGGCTGCCT GGACTGGCTC GACGCGCAGC 
    CCGACGGCTC CGTCGTGTAC GTGGCCTTCG GCAGCATGGC CATCTTCGAC 
    GCGAGGCAGT TCCAGGAGCT CGCCGTGGGG CTGGAGCTCA CCGGCCGGCC 
    GTTCCTGTGG GTTGTCCGGC CGGACTTCAC CCCTGGCCTG AGCACGGCGT 
    GGCTGGACGC CTTCCGGTGC CGCGTCGCCG GCAGGGGCGT GATCGTCGAG 
    TGGTGCTCGC AGCAGCGCGT GCTGGCGCAC GCCGCCGTGG CGTGCTTCGT 
    GTCGCACTGC GGGTGGAACT CGACGCTGGA AGGGGTGCGC AACGGCGTGC 
    CGTTCCTGTG CTGGCCGTAC TTCTGCGACC AGTTCCTCGA CCGGAGCTAC 
    ATCACCGCCG TGTGGCGCAC CGGGCTCGCC GTGGCGGCCG GCGAGGAGGA 
    CGGCGTCGTG ACGAGGGACG AGGTGAGGAG CAAGGTGGAG CAGGTCGTCG 
    GCGACGGCGA GATCAGGGAG AGGGCGCGGC TGCTCAGGGA CACGGCGCGC 
    GCCTGCGTCA GTGAGGGTGG CTCGTCGCAC AAGAATTTCA GGAAATTTAT 
    TGACCTCCTA AGTGAGTGAC ACTGCAACCG ATCGACTGAT ATGCGTCCAA 
    ATTAATACTG TACTTCCTGT TTGTACAAGC AGAACTCCAT ACTTACCTGC 
    ATTACTGTAT CCGCATTGGT GCAAAATCAA AACAATTTAC CATATACTGT 
    ATTTATATCT ATCTTGTTAC TTGCATGATC

    Gene models with high sequence identity

    1. AT3G02100.1 [+] show detail - UDP-Glycosyltransferase superfamily protein
      E-value: 9e-94; Score: 341.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther UDP-GLUCOSYLTRANSFERASE 7.3e-105
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 7.3e-105
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 4.3e-22
    Gene3D no description 4.6e-17
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 2.7e-59

    See the detailed result >

    AT3G02100.1

    Model type
    Protein coding
    Short Description
    UDP-Glycosyltransferase superfamily protein
    Computational Description
    UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT1G05675.1); Has 7982 Blast hits to 7880 proteins in 431 species: Archae - 0; Bacteria - 322; Metazoa - 2378; Fungi - 47; Plants - 5098; Viruses - 73; Other Eukaryotes - 64 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR