K32035

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32035

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
cauline leaf (PO:0000013)
  • decreased size (PATO:0000587)
    (Cauline leaf::Shape::small)
  • present in fewer numbers in organism (PATO:0001997)
    (Cauline leaf::Number::few)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
sporophyte vegetative stage (PO:0007134)
  • decreased speed (PATO:0000304)
    (Adult plant::Growth::slow)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32035

Determination of introduced cDNA(s)

  • J023122C23 - Rice Full-length cDNAs - Original: J023122C23

    full reading [+] show sequence

    Nucleotide sequence: J023122C23 - full reading 
    ACTCACCAAG ACCACCAGAC ATGAAGCTTC ACGTCGTGGC AGCCATCCTG 
    CTGGCCGTGG CCGCGTCGTC GTCGCCGCCG CCCGCCGCCG CCGTCACCTA 
    CGAGGTGAGC AACGAGGCGG CGAGCACCGC CGGCGGCCAG CGGTTCGACC 
    GGGAGTACGG CGCCGGGTAC GCCAAGCAGG TGCTCGCCGC CGCCTCCTCC 
    TTCACCTGGA GCATCTTCAG CCAGCCGAGC GCCGCCGACC GGAGGCCCGT 
    CGACGCCGTC GTCCTCGCCG TCCGCGACGT CGACGGCATC GCCTCCACCA 
    GCGGCAACAC CATCACGCTC GGCGCCGGCT ACGTCGCCGG CGTCACCGGC 
    AACGACTTCA AGACGCAGGT GACCGGAGTG TTGTACCATG AGGTGGTGCA 
    CGTGTGGCAG TGGGGGCTGC AGGATTACGG GGCGCATTCG TGGGTGTACG 
    AGGGGATCGC CGACTTTGTG CGGCTGCGCG CCGGCTACCC AGCGGCTGGT 
    TGGGTGCAGC CGGGGCAAGG GAACAGCTGG GAGGACAGCT ACTCCGTGAC 
    GGCGAGGTTC TTCGACTACT GCGACAGCGT CAAGCCAGGG TTCGTTGCCG 
    ACCTGAACGC TAAGCTGAAG AATGGGTACA ACGTCGACTA CTTCGTGCAG 
    ATCACCGGGA AGACCGTGCA GCAGCTGTGG CAGGATTACA AGGCCAAGTA 
    TGGAAACTGA TGATCGATCG ACGCAGAGAA TGAATAAGAC AAGAGATTAC 
    CATCATTGAT TGATATAGAT TGTTGTAACT CATAGCTATG GAGTTTACAC 
    AATTATTGTA TTGCTTACGG ATGATAGAAT AAAGGGACGC TGTCTAGTTT 
    TCAATC

    Gene models with high sequence identity

    1. AT2G15220.1 [+] show detail - Plant basic secretory protein (BSP) family protein
      E-value: 8e-48; Score: 187.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G15220.1

    Model type
    Protein coding
    Short Description
    Plant basic secretory protein (BSP) family protein
    Computational Description
    Plant basic secretory protein (BSP) family protein; INVOLVED IN: defense response; LOCATED IN: endomembrane system; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family, basic secretory protein (InterPro:IPR007541); BEST Arabidopsis thaliana protein match is: Plant basic secretory protein (BSP) family protein (TAIR:AT2G15130.1); Has 296 Blast hits to 296 proteins in 84 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi - 66; Plants - 170; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR