K32036

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32036

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32036

Determination of introduced cDNA(s)

  • J013170J12 - Rice Full-length cDNAs - Original: J013170J12

    full reading [+] show sequence

    Nucleotide sequence: J013170J12 - full reading 
    GAATCCGCAA ACCAGTTCGC CCCCCAAATC CGACCGCCGC TCAAGCCCCA 
    CGCCGCGCCA CCGGCCGCCA CCGCCGCCGC GGACAGCCGC GATGGCGAAG 
    AAGATGGGCG TCAACTCCAA GGCGGAGGCG GCCCGCGAGC GCCGCTCCGT 
    CGCGGAGGCC GACCGCCGGG ACCGCGTCGA GCGCGCCAAG GAGGAGGAGT 
    ACTGGCGCGA GGCCGAGGGC CCCAAGTCCC GCGCCGCGCG CCGCCGGGAG 
    GAGGACGCCG AGAAGCGCGC CGAGGCCGCC GCCCGCAAGG CCGAGAACCG 
    CCGCCTCGCG GAGGCCGAGG CCGCCTCCGC CTCCGCCTCC GCGCCGTCCA 
    AGACGGCCGC CAGCAAGGCC TCCCGCGTCG GCGCCCCGGC GCCCAAGGTC 
    ACCGAGGCCG AGCTCGCGCG CCGCCGCGAG GACGAGCGGC TCCGCCTGGA 
    GCGCGAGGCC GGGGCCGCCA AGAAGCGCGC CGCGCGCACC GCCGAGGAGG 
    AGGAGTACGA GCGCGTCGTC TTGGTCGCCA ACACCAACAG GGACGACTCC 
    ATCATCGAGG CGAGGTCGGT CGACGAGGCC ATCGCGCGGA TGTCGCTGGT 
    TGACTCAGAG GGAGCCTTGC CCGCCGACAA GCACCCTGAG CGTCGCCTGA 
    AGGCATCATT CAAGGCATTT GAAGAAGCAG AACTCCCTAA GTTGAAGGAA 
    GAAAAGCCAG GCCTAACACT GAATCAGTAC AAAGACATGA TATGGAAGCT 
    ATGGAAGAAG TCTCCAGACA ACCCTCTTAA CCAGGCTGCA GAGTGATGAT 
    GCATTCCTGC TGAATTGTAG AATTTCCAAG ACTTCCAAAT GGGTCAGAAC 
    TTCATCAGAT GCTCATGGAC TGAATGTGTG GGAGATGATC AGCTTCTCGG 
    CTAATAATTT ACAAAGTGAT GCAGTATATA TCATGTGAGC TCGTTTTTGT 
    TAGAGATTTT CTTCTGGTTC CTGTTGTGCG TAATGTGGTC GGGGGCACGT 
    TCACTTGAAT TTTAACGATT GTCAATTCGA AATTGTGGTT CAT

    Gene models with high sequence identity

    1. AT1G16210.1 [+] show detail - unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014 (InterPro:IPR010...
      E-value: 3e-23; Score: 106.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther Protein of unknown function DUF1014 2.8e-33
    Coil coiled-coil 0
    Coil coiled-coil 0
    HMMPfam Protein of unknown function DUF1014 7.3e-42

    See the detailed result >

    AT1G16210.1

    Model type
    Protein coding
    Computational Description
    unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014 (InterPro:IPR010422); Has 16107 Blast hits to 8386 proteins in 1107 species: Archae - 26; Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants - 526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR