K32101

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32101

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
rosette leaf (PO:0000014)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
stem (PO:0009047)
  • increased thickness (PATO:0000591)
    (Stem::Shape::thick)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32101

Determination of introduced cDNA(s)

  • J033033E17 - Rice Full-length cDNAs - Original: J033033E17

    full reading [+] show sequence

    Nucleotide sequence: J033033E17 - full reading
    GATTCACTAA TTGGAACTTG GTGTTGGGAG TCCCCGTCGA CTCGCACTCG 
    ACAGTCGATC GCCAACAAGC CCAAACCCGG AGAGAGCCGG AGGAGATCCG
    TCGTCTCCCG CATCCTCACC GGCCGCCGGC GATGGAGAAG GGCAAGGGCC
    TCGCCCGCCG CTGGGCGGTG GAGCTCCACG ACGCCTCCTC CTCCTCCTCC
    TCCCACTCCT CCATCCCCGA CCCGCCCGGC TTCACCAGAT CCGCCCCCGA
    CGCGGACGAC GCCGCCGGCG CGCGGCAGCG GAAGGATTCC GAGACCGCGT
    GGAAGGCGCA GAAAGCGTGG GAGGTGGCGC AGGCGCCGTT CAAGAACCTG
    ATGATGATGG GTTTCATGAT GTGGATGGCC GGGAGCACCG TCCACCTGTT
    TAGCATAGGT ATCACGTTCT CCGCTCTGTG GCAGCCCATC AGCGCCCTCC
    GCTCTGTTGG CAAAGTTTTT GAACCATTCA AGGACCCAAG GGTGGATACT
    CTAGCACCTA AGTTGGTCTT TATTGCTCTC AACTTGGCAG CTATGGGTTT
    AGGTGTATGG AAGCTCAATA CGTTGGGTCT TCTTCCAACA AATGCATCAG
    ATTGGGTGTT TTCACTGGCT CCTGCTCGGG AGGTTGAATA TGCTGGTGGA
    GGGATCCCCT TGCACTGAAA CCTTTATGTG CTTCAGTTAG TACTTATTAA
    AGTTTTACCA CTTGGAAGAT GGTGTCTGTA CTAAGCGAAA AATTACCCTG
    CAGATGGGAC AAGTCTGGTT TTTGTGAGGA TCATATTTCA GCACCTGTAC
    TAAACTTGCA CTATATCTTG AGACAAGTAA CTTACAATTT CCTTGACCCC
    TTTTGTTTAC ACTGGTTATT TATACAGAGT CAGTTGATTC TTAGT

    Gene models with high sequence identity

    1. AT5G10780.1 [+] show detail - CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85...
      E-value: 6e-61; Score: 231.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther SUBFAMILY NOT NAMED 4.7e-94
    HMMPanther Protein of unknown function DUF1077 4.7e-94
    HMMPfam Protein of unknown function DUF1077 1.4e-39

    See the detailed result >

    AT5G10780.1

    Model type
    Protein coding
    Computational Description
    CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR