K32236

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32236

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32236

Determination of introduced cDNA(s)

  • J013075C23 - Rice Full-length cDNAs - Original: J013075C23

    full reading [+] show sequence

    Nucleotide sequence: J013075C23 - full reading 
    GGCCCGATCG ATCGTACTAC GTGCAGAGAG CTTAGCTAGC TGCGGCGCAC 
    GCACGGTTTG TACAAGGTAC AGTATAGTAT GACACCGACC GTCGCGACCA 
    CCACCCCGGC CGCCGCGGCG GCGACGACGG CGGCGGCGGC CGAGGTGAAG 
    CCGGCGAAGC GCTCCGTCGG CCTCGGCCTC CCCGCGCTTC CGCCATTATT 
    GCCCGGCCTC GCCTCCCACG GCCAGCCCCG TGTCGCGTCC TTCTGCAAGA 
    GGCTGGCGAG GAACGTGGTG GCCATGGCGG CGGGGGAGGC GCCGGCGGCG 
    CCGCTCGCCG CCAACGCGGA GATCACCGAG TTCATCAACG CCCTCAAACA 
    AGAGTGGGAC AGGATTGAGG ACAAGTACGC GGTGACGACG CTGGCGGTCG 
    CTGCGTCGCT CGGGATGTGG AGCGCCGGCG GAGTTGTATC GGCAATTGAC 
    AGGCTTCCTA TCGTTCCTGG TCTCATGGAA GCTGTTGGCA TTGGCTACAG 
    CGGGTGGTTT GCATACCGGA ACCTGCTGTT CAAGCCTGAC AGGGAAGCTT 
    TCTTTGCAAA GGTTAGGGAG GTCTACGAGG ATATAATCAG CGGTTAACAG 
    AGATACTACT TATATACAAC TTCAGTTCAA GGGAGGCTGC TACTGGATTA 
    ATTATCTGTA CTGTATCACA GCATAGCATC TAATTTAATT GCTCTTACTC 
    AATGTATGTC TATATAAGTT GGACATTACT GCTAAATAAC ATTTTTCAGA 
    ATGTTTACTC AGAGTTGAAA TTCTTTGCC

    Gene models with high sequence identity

    1. AT2G46820.2 [+] show detail - photosystem I P subunit
      E-value: 9e-27; Score: 117.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G46820.2

    Model type
    Protein coding
    Short Description
    photosystem I P subunit
    Curator Summary
    Encodes the P subunit of Photosystem I. About 25% of the TMP14 pool appeared to be phosphorylated, and this ratio is not affected by light. Contains seven phosphorylation sites on threonine residue and chloroplast targeting signal. Located in the proximity of PSI-L, -H and -O subunits.
    Computational Description
    photosystem I P subunit (PSI-P); FUNCTIONS IN: DNA binding; INVOLVED IN: photosynthetic electron transport in photosystem I; LOCATED IN: in 6 components; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52220.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR