K32306

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32306

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32306

Determination of introduced cDNA(s)

  • J013025D05 - Rice Full-length cDNAs - Original: J013025D05

    full reading [+] show sequence

    Nucleotide sequence: J013025D05 - full reading 
    GGCAGAGTGG TGTGGTGGTA TTGGCGGACG CCGCTGACAC CGTCGCCGCC 
    GACCGGCCGT TGTCCGGCAG GCAGAGGCCA CTGGTGTCCA ACCGCGGCAA 
    GTTCGCGCTA GGTTTCTTCC AGCCAGAAAA CTCAGAGCAT TGGTACCTTG 
    GCACCTGGTA CTACCAAATC TCCAAGCACA CGCCGGTCTG GGTTGCAAAC 
    AGGGGCTCTC CAATCTCGAA TCCGGACACC TCACAACTAA CCATAGCAAC 
    CGACGGCAAC ATGGTATTAC TCGACAATTC AACAACTGCA ATTTGGTCCA 
    CGAACATCTC CAACTTCACC TCCAATTCCA CGGTCGGTGT CATCCTCGAC 
    TCCGGCAACC TTGTCCTCGC AGACGCATCG AACACCTCCA TCATCCTCTG 
    GCAGAGCTTC GACCATTTCG GCGATACCTG GCTCCCCGGC GGCAAGCTCG 
    GCCGGAACAA GCTCACCGGC GTGAGCACTC GTCTTGTCGC ATGGAAGGCA 
    CGCAATGACC CAGTCCCCGG CGTGTTCTCC CTCGAGCTGG ACCCGAACGG 
    CACGAGCCAA TACCTGCTCC AATGGAACAG TACACTGCAG TACTGGACAA 
    GCGGCAACTG GACCGGCCGC ATCTTCACCG GCGTGCCGGA GATGACGCCG 
    ACCGGCAGAT ACCCGAATTC GCTGTACACC TTCGACTACG TCAACGGCGA 
    GAACGAGAGC TACTTCGTGT ACGACCTCAA GGACGACTCG GTCCTCACGA 
    GGTTCGTCTT GGGCGAGATG GGGCAGATCC AGTTCTTGAC ATGGATGAAC 
    GGCGCCAACG ACTGGATGCT GTTCTGGTCG CAGCCCAAGG CGCAGTGCGA 
    CGTGTACTCG TTGTGTGGGC CGTTCAGTGT CTGCACCGAG AATGCAATGG 
    CATCTTGTAG CTGCCTCCGT GGCTTCGGTG AGCAAAACGT TGGCGAATGG 
    TTGCAGGGAG ATCACACTTC AGGGTGCAGA AGAAACGTGG AGCTGCAGTG 
    CAGCAGCAAT GGCTCGGTGG TAGGAAGGAG TACTGATCGG TTCTACACGA 
    TGGCTAATGT AAGATTACCA AGCGACGCAG AGAGTGTGGT GGCCGCAGGT 
    ATTGATCAGT GTGAGGAAGC ATGCCTAAGT AATGTTCTTG CACTGCCTAC 
    TCCTACAATG GCAGCTGCTC ACTGTGGTAC AGAGACCTCA TCAACCTGCA 
    AGATGTGAGT GTCATTGGTA GCCAAGGCAG CAGCGCAGTT TTGATTCGAT 
    TGGCTGCTTC AGAATTGTCT GGACAGAAGC AAAAGCATAC CAAGAAGTTG 
    ATCACTTTTT CTGTCCTTGC TACTGGTGCT GTACTACTCA TGATAGCTGT 
    TTTGGTTGTC ATCTTGAGAA GAAGAATGGT GAAGGCAACA ACACGAGTGG 
    AAGGTTCCTT GATATCATTC ACATACCGTG ACCTGAAATC TGTGACCAAA 
    AATTTCTCCG AGAAGCTCGG AGGAGGCGCC TTCGGTTCAG TGTTCAAAGG 
    GTCACTGCCT GATGCAACCA TGGTGGCCGT GAAGAAGCTC GAAGGTTTTC 
    GTCAGGGGGA GAAGCAGTTT CGCTCAGAAG TGAGCACAAT CGGCAACATC 
    CAACACGTCA ACCTGATTAG ATTGCTCGGG TTTTGTTCAG AGAAAACTCG 
    AAGACTACTC GTCTACGAGT ACATGCCGAA TGGTTCGTTG GACAAGCATC 
    TTTTTGGAAG TAACCAACAC GTCCTGAGTT GGAACACGAG GTACAAGATT 
    GCTCTTGGAA TCGCGAGGGG ATTAGACTAC CTCCACGAGA AATGCAGGGA 
    TTGCATAATA CACTGCGACA TCAAGCCAGA AAACATACTG CTCGATGGCT 
    CGTTTGCTCC CAAGGTTGCG GACTTCGGCC TCGCCAAGCT CATGGGCCGC 
    GACTTCAGCC GGGTGCTGAC CACTTCGAGG GGCACGGTGG GGTACATCGC 
    GCCGGAGTGG ATCGCCGGCA CGGCCGTGAC GGCGAAGGCG GACGTGTTCA 
    GCTACGGCAT GACGCTGCTC GAGATCGTGT CGGGGCGGAG GAACGTGCAG 
    GAGCAGGGTG GCGCGGCGGT GGACGGCCTG CTCCCGTTGC TGGCGGCGAG 
    CACGCTCGGC GGCGGTGGCG GCGGCCGGGA TGAGCTGGTC AGCGCCGTGG 
    TGGACGGCCG TGTAGGCGTC AACGCCGACA TGGGCGAGGT GGAGAGAGCA 
    TGCAGGGTGG CGTGCTGGTG CATCCAGGAC GACGAGAAGG CGAGGCCGGC 
    CATGGCGACG GTGGTGCAGG TGCTCGAAGG GCTTGTGGAG ATCGGCGTCC 
    CGCCGGTTCC GAGATCACTC CAAATCCTCG CGGACCTCGC GAATCAGTCG 
    AATAACTTGC GGTTTTTCTC CGATTTACCG TCAAAGTGAG GCGGTTGCAG 
    GCTTGACGCC AGTCTGCGTT TGGGCGGCTA AGCGTTAAAA TCGCCAGAAC 
    TTGCATACTC ACGTTACCAA AACTTGCTAT ACTTCATTTA ACTAACATGC 
    TTAACATGTG GCCAATAAAA TTGAAGCCAT ACTTCAGCCA TAGGAGAGTA 
    CACTTGCCAC ACTTTTATGT GTCAATGACA GTGGGACCCA CATCATGGTG 
    AAGGAATCTT GCCAAAAGTG TGGCACCAAC CG

    Gene models with high sequence identity

    1. AT2G19130.1 [+] show detail - S-locus lectin protein kinase family protein
      E-value: 0; Score: 270.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Serine/threonine-protein kinase-like domain 2.4e-48
    HMMPfam Curculin-like (mannose-binding) lectin 1.3e-32
    HMMPfam S-locus glycoprotein 5.8e-31
    HMMPfam PAN-2 domain 0.000017
    superfamily Protein kinase-like domain 5.5e-73
    superfamily Curculin-like (mannose-binding) lectin 9.5e-31
    ProfileScan Protein kinase, catalytic domain 37.389
    ProfileScan Curculin-like (mannose-binding) lectin 18.4
    ProfileScan Apple-like 7.509
    Gene3D no description 4.1e-19
    Gene3D no description 7.7e-48
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMSmart Serine/threonine-protein kinase domain 5.6e-30
    HMMSmart Tyrosine-protein kinase, catalytic domain 3.5e-22
    HMMSmart Curculin-like (mannose-binding) lectin 2.7e-34
    HMMPanther RECEPTOR-LIKE PROTEIN KINASE-RELATED 0.00000013
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 0.00000013
    HMMPanther S-RECEPTOR KINASE 3.1e-180
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 3.1e-180

    See the detailed result >

    AT2G19130.1

    Model type
    Protein coding
    Short Description
    S-locus lectin protein kinase family protein
    Computational Description
    S-locus lectin protein kinase family protein; FUNCTIONS IN: protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, recognition of pollen; LOCATED IN: endomembrane system; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Apple-like (InterPro:IPR003609), PAN-1 domain (InterPro:IPR003014), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase, catalytic domain (InterPro:IPR000719), S-locus glycoprotein (InterPro:IPR000858), EGF-like (InterPro:IPR006210); BEST Arabidopsis thaliana protein match is: receptor-like protein kinase 4 (TAIR:AT4G00340.1); Has 116366 Blast hits to 114909 proteins in 4332 species: Archae - 99; Bacteria - 12770; Metazoa - 42761; Fungi - 9470; Plants - 34242; Viruses - 402; Other Eukaryotes - 16622 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR