K32510

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32510

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
cauline leaf (PO:0000013)
  • decreased size (PATO:0000587)
    (Cauline leaf::Shape::small)
  • present in fewer numbers in organism (PATO:0001997)
    (Cauline leaf::Number::few)
rosette leaf (PO:0000014)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
stem (PO:0009047)
  • decreased thickness (PATO:0000592)
    (Stem::Shape::thin)
  • abnormal (PATO:0000460)
    (Stem::Shape::zigzag)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32510

Determination of introduced cDNA(s)

  • J013043N06 - Rice Full-length cDNAs - Original: J013043N06

    full reading [+] show sequence

    Nucleotide sequence: J013043N06 - full reading 
    GTCAATGTAA CCACAGCTAT CGTCTGCCCT AGAGAGAGTT GAGACCACGC 
    TGCCTAGTAG GTTGACTCCG CCGCCTCGAC CAGCAACGCT GCCGCCATTT 
    GCACACGCTA GCTCGACCTC TTGCTCTGTT GTCGTCGTTC TCGCTTCCGA 
    TGGCGGCTGC AGGCGGCGGA TCGTTGCTGG ATCAGTCGAG GCACGCCATG 
    CACAGCTGGG TACTCAAGAA TATAGAGAAA TTGGCAGGAC ATTATGGTGC 
    AGAGTTCAAC TCTTTGCGGG CATTTGAGGA CAGGGTATTC AATGAGACCA 
    GCAGCATTGA TGATTATATT TCTAAAATAT CAACGAAGAT GGCTATTTTG 
    GAGCGACCGC AGTCTTCTTC AGGTATGCAG CATCAAGGGC AGATGGGAAA 
    TCAAACGAGG CTGCCTACTA CAGTTATGCA AGAACAGCCA CAGCCACAGC 
    AGCAGCCGCA TTTGATGTCA AATAATCATC ACCAAACACA TGGAGGATGG 
    CAGAGCAATG TTGCAAGGGT ACAGATGATC ACTGGTGTTG GAGAAGTGAA 
    TTGGAGGGAG GAAATGTTTC AGAAGATCAG CGTTTTAAAG AACTCTTTCT 
    TTTCCGAGCT TACGGATTTT GACCGTTTAC TTCACAATTG CCAAAAAACA 
    GAAGAACAGT TGCAGTCACT ACCTAAAAAG CAAGCTGACC AATACAAGCG 
    GATAACAAAG CTCAAGGATG CGGTTAGGAG TGCTCTGGAT TTATTGCAGC 
    TCCAGAAGAG CAGCATCGAT GAAGGCATGA AGGTGAAATT CTGCAAGTAC 
    GAAAGCTCCA TACATAGCCT ACTCAGATTC TACAGGGAAA CAAAAGCTAA 
    AATTAATGAG ATGAATGCAA ATCGTCATAA CAATCAGCAA GAGCAACCTG 
    CAGGCCTGCC GAGGCAAAGA ATTACTGACA GAACTCCATC GTCAGCTCGT 
    CGGCAAAACC GCAATGACAA CGTGATAGGC CAATCAGAGG ATAAATTGCG 
    ATGCAGGGTT GAATCAGTTG TAGCCAAGAA GAAGCCCATC GACCGCCTAA 
    TCAACGCTCT GCGGCACAGT GTAGAGGATG ACCGTACGGA CGTCAAGAGG 
    CAGAAAACAC GGCATGTTAA CAGTGCCCTG GCGAACGAGA TCGACGCCAT 
    GAACGCCAAG CTGATCGATA CCGTGGTTAG AATCGCCGGT GAGAAAGATG 
    GTGGGACAGA GATTGAATTC AGCTACACTG CAGTGTCTCT TGCACTAGAC 
    ATGAAGCAGC TATTTGCAGC ATATGGGACG TCTCCTGTCA AGCCGGTGAA 
    ACTATTCGTC CCTGCTGATT ACCCTCGAAG TTCTCCGGTG GTCTCGAACA 
    ACAACGATGA TGGAGATGAA CAGCGGCGAG GAATGTTCGG CGAGATCTCG 
    GGCATGGTCA GTGCGGCTTT TCACTGCGCG CTGCGTGAGC TCCCGCCGTC 
    CATGTCAGTC AAGCAGATGG CCTCGGAGTG GAATTCCTGC GTGCAGATGA 
    TCATGAAGAA ATTTGCGATA CGGCACGGTG GAGGAACGTT CAGCTCCAGG 
    CATGGCCAGT GGATGGATTG CACCGTTGAA TGATTTAGTA CCGTGAGGTA 
    CCGATACCTC GAGATACTTT TTGTTGTACC GAAGCAAATC TCTTAATTAT 
    TACATGAGGA TGAAGTGATA CGGAGAACCG TATTTGATCT GTTGTTATTG 
    CTGCTGGAGG GTACATGCAT AATCCGCTCT GTGTATCATT TGTTTTGATT 
    AAGCTGGTAT TGCTTTTGAT ATTTCTCTGT CTGGATTTTG TAATTGGAAC 
    AAGCAAAATC GCTTGTAGGA CATGTATTTC TGAAAATGGT AACTATCTAT 
    CTTTGAAGAG CCC

    Gene models with high sequence identity

    1. AT1G15780.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); ...
      E-value: 6e-21; Score: 99.80

     

    InterPro Scan Digest

    See the detailed result >

    AT1G15780.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR