K32531

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32531

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32531

Determination of introduced cDNA(s)

  • J013116C06 - Rice Full-length cDNAs - Original: J013116C06

    full reading [+] show sequence

    Nucleotide sequence: J013116C06 - full reading 
    GCTGGTCTCC ACCCTCCCTT TCTCTCTCTA GTCCTCTAGA GCCGAGGGTT 
    GCTGCGAGGA AAGCGTAGGA GAGAGGGTTG CTGGCTGCAG CCCCGGCGAG 
    AAGCGCCATT GTTGTCGTCG TTGGGCCAAG AACCAAGAAA CCAAGAAGAC 
    AAGAGGAGGA GGAGGGGGGA AGAAGACGGA AGAGAGAGAG GAAGAGGCAC 
    TGGATAGGTG CATCCTTTGC CTCTAGCCGC TTTCTCTTTC TCCTTCCTGG 
    AGGGGGGAGA GAGAGAGAGG AGTGGGAGAG GAAAGGAGAG TAGATGGGCG 
    AGATGGTCTT GGCCGGGTAT GGCATGGACA AGGCGGTGAG GAGCAGCGTC 
    AGCTTCGAGA CGCCGTGCGG CAGGCTGCTG CGCGAGCTCG AGCAAATATG 
    GACTGAGATT GGGGAGCGCG AAGAAGATAA AGATCGCATG TTCTTAGAAC 
    TTGAAACAGA GTGCATGCGT GTGTACCGTC GAAAGGTTGA TAGTGCCAAT 
    GCTGAGAGAT CCCAGCTCCG TCAGTCATTG ATGGCCAAAG AAGCAGAGCT 
    TAAAGTTTTA GTGGCTTCAA TAGGTGAAAT TACCCCAAAA TTTAAGGTGG 
    ATGAAAAGCA ATCATTGAAA GAGCAACTTG CCAAAGTGAC GCCTCTACTG 
    GAAGATCTCA GGTCAAAGAA AGAAGAAAGA ATAAAACAAT TCTCACTTGT 
    CCAATCTCAA ATCGAGAAGA TAAAGCACAA ATTTCGGATC ACAATAATCA 
    GCATGACAAT GGTCCGGTCA ATCATTCCAA GGACAATCAT GATTTGTCAA 
    CCAGAAGGCT TTCTGATCTT CAAGCGGAGC TTCGCAATTT ACAGAAAGAG 
    AAGTCTGATC GCCTTCAGAA GGTCTTCATA TACGTCGATG AAGTGCACTG 
    CCTATGCTCT GTGCTTGGGA TGGATTTTGC AAAGACAGTT AAAGATGTGC 
    ATCCAAGTTT ACATGGGGCC AACTCAGAAA ATTCAACGAA TATCAGTGAT 
    AGCACTCTTG AAGGTCTTAC TGAGACCATC CTTAAGCTCA AAGCAGAAAA 
    GAGGACTAGA GTTTCGAAGT TGCAAGAAAT CGTCGGAAAG CTCCACAAGT 
    TATGGAATTT GATGGAGTCA ACTGAACAAG AGAGGAGACA TTTCACCAGA 
    GTAGCTGCTG TTCTTGGATC TACTGAGGAA GAGATCACTT CATCTAGTGT 
    CCTGTCGCTG GAGACAATTC AGGAGACAGA AGAGGAAGTT GAGAGACTAA 
    CTAAACAAAA GGCAAGTAGA ATGAAGGAGC TTGTTCTTAA GAAAAGGTTA 
    GAGCTAGAAG ATATCTGCAG TAATGCGCAT ATGGAGCCTG ATATGAGCAC 
    AGCACCTGAG AAGATAACCG CATTGATTGA TTCTGGTCTA GTGGATCCTT 
    GTGAACTTCT TTCCAGCATT GAAACACAAA TAGCAAAAGC GAGGGAGGAG 
    TCCCTAACCA GGAAAGATAT CATGGAGAAA GTAGACAGAT GGCTATCAGC 
    TTGTGATGAA GAAACTTGGC TTGAGGAATA TAACCAAGAT AGTAGCAGGT 
    ATAGTGCTGG TAGGGGTGCC CATATAAATC TCAAGCGTGC AGAGAAGGCA 
    AGGATACTTG TTCAAAAAAT ACCATCAATG ATTGACAACT TGATAGCTAA 
    AACATTTGCG TGGGAGGATG AAAGAAGTGT GCCATTTTTA TATGATGGAG 
    CCCGTCTTGT TGCCATTTTG GAGGAGCAAA AACTCAGAAG GGTACAAAAG 
    GAAGAAGACA AGAGACGACA CCGGGACCAG AAGAAACTGC AAAGCTTATT 
    GCTTAAGGAG AAAGAGTTGA TTTTCGGCTC CAAACCTAGT CCAAAAAAGA 
    CAAGCAGCTT TAATAGGAGG ACGAGCAGCC ATCACCCGAA TGGAAATGGA 
    GCTGGGTTCA TGACCCCGGT GCCCCGTAGA GTTTCTGCAG GCAGTGCCAC 
    TCCTGAGCTT CTAACTCCAC GCTCATATTC TGGACGGTAC AATAATTACT 
    TCAAAGAGAA CAGGAGGCTG GCTGCTGCAC CACTGAACTT CTCAACGGTT 
    TCGAAGGAGG ATAGTATGTC ATCCTTTGCC TCCATCAGCG GCTCAGAACC 
    TGATTCTCCT TTGGTTTTGC ACTGAGATCC CATCGTTCGA TTGGACATTT 
    TCGAGAATGT CACAGTTGAT CTTTTGAGGT TCTGATAATC CTGATTTCCA 
    AATGCTGCAT TTCTGGTTAG GGATGAGAGA CTTCTCAGCA AGAAGGATGG 
    TAGTGAAGAC TATCCACGAC ATTGGGCCAT TGTGTGTTAA CTGGTTGACA 
    TTGCTAATGA GTGACGACAG GTTGTGACAG GATTTAGATA AGATTTGCCT 
    GTAGATATAT GACCTAACAT CTGCGGTGCT GTTGTACCTA AATTACGTCG 
    ATTGATCAGT GGGTTGGTTA GGAAGCATGC CTAAGTTGTG CATTATATTC 
    GTTTTCTTGG TATTCTTTGA GTTTTGTATT TAGTCATTGT TTTGCATGTG 
    AAAAGGAGTT GGTGTTGATT TGCAATCCAA AGGTGCTGTG TAATTTCATC 
    CTGCAGACTC AACCTGAGGC CTTTGATTTG TGTGCTGTAC TGCTATGGAA 
    ATCGTAGTTC ATACTTCATT CAGGAAGGTA ACTCAAAGGT CGCATATGTT 
    TTACTACCAT TTAGTTCATA CTTCATACTT ATCTACTCCC TTCGTTTCAC 
    AATGTAAGAC TTTCTAATAT TGCCCACATA CATTTAGATG TTAATGAATC 
    TAGACATATG TGTGTTTAGA TTTATTATCT ATATGTATGT GGATAATGTT 
    AGAAAGTCTT ACATTGTGAA ACGGATGGAG TACTTGATTA TCGGTAAGAA 
    ATAAAACTAT ATGTTACAAA CCTAACAAGT GGGCTAAGCA ATGCAGTAGA 
    AGCAAGTGGA CTTGTTACCA ATTGCTGCTG CAATTGTGGG ATCAAAACTG 
    TTGGTCAAGG ACTGAAGATT TGGGCGAATA TTGAATTATA TTGATATAAG 
    CTCCTCCTAA TGGAGTAACC AAGTCGCTTA CAACGGGTAA TTAAAATACA 
    GGAAAGAAGA AAACAAGGAG GGAGCATACT AGTACATAAT AAAGAGAAAG 
    AAACAGAATT AAACATGGGA GGAGCCCGAA GAAATAGCAA TTGAGAAGAC 
    AGCCTTCCAC CCATCTAGGG CCGGTCCATC TGCTTCTTTG ATGTAAAATT 
    CACGCACCTG ATGGTGGTTG ATTATTGAAG ATAACGTTGT TTTTGTGATT 
    CCAAATCCTC CAAAAAGCAG AGGAGATAGA AGCTCTGATA ATCTTTCATT 
    GCGATAGAAG CTCTGATAGT CTTCAACTGA GGAAATATTT GGCCAGCACC 
    CCTATTTTGG ACCAGAAAGA AGCAAATTAC CTTTTGCTGA CGGAGGGAGT 
    ACATTTTACA ACACCCTTGC TGCATTTTGG TCTTCCAAAG ATATAGGGAG 
    GCCTGACATG TGTAAAGAAC AAGCCTGTGT AGTAGCTAAA ACGCCAGTGA 
    ACAGCAGAAC AGTAAACAAC TTGAGAATTA CCCCTTTCTT AGCATGAAAC 
    GGCAACTCCA AGATAAAGTT GACACGCAGT AGCAAAGTTC AATTGTATTA 
    CTGTACAGTT TGGCAACACG ATTTCATCTT TTGACGCT

    Gene models with high sequence identity

    1. AT2G01910.2 [+] show detail - Microtubule associated protein (MAP65/ASE1) family protein
      E-value: 3e-128; Score: 457.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Microtubule-associated protein, MAP65/ASE1-type 2.8e-60
    HMMPanther Microtubule-associated protein, MAP65/ASE1-type 8.3e-102
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT2G01910.2

    Model type
    Protein coding
    Short Description
    Microtubule associated protein (MAP65/ASE1) family protein
    Curator Summary
    Binds microtubules. Induces a crisscross mesh of microtubules, not bundles. Not involved in microtubule polymerization nor nucleation. Localizes to mitochondria.
    Computational Description
    ATMAP65-6; CONTAINS InterPro DOMAIN/s: Microtubule-associated protein, MAP65/ASE1-type (InterPro:IPR007145); BEST Arabidopsis thaliana protein match is: microtubule-associated protein 65-7 (TAIR:AT1G14690.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR