K32612

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32612

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32612

Determination of introduced cDNA(s)

  • J033005P04 - Rice Full-length cDNAs - Original: J033005P04

    full reading [+] show sequence

    Nucleotide sequence: J033005P04 - full reading 
    GGGAGTGGGT AAAGCCCTGG CTTTCCTCCC CCAACAACTC GGCCAAATTC 
    AAAGCAAAGC CGCCATTACT GCTCCTCTTC CATTCCACTG GGGACGTACG 
    AGCTCCGCGC ATCCCTTCCA TTCCATTACT GACCTTGGCT GCTGCGGCTG 
    CAGTGCAGAG GGGGTTTGGT GGTGCGGTTG ATTTGAGCAA TAAATTCTCT 
    AGGGGGGAGG GAGGTATCGG TCATGGCTGC CGCTGCTGCA AGGAGGGGCT 
    CATCGCTGCT CTCTCGCTGC CTGCTGTCCA GGCCCGCCGC CGCCGCCTCG 
    CCTGCTGTCC CCTCTGCGCT CCGCAGGGCA GATGGGACAC AAGGATTGTT 
    GCCGGGAATC CTTCAGAGGT TCAGCACTGC AGCAGTAGCA GAGGAGCCCA 
    TATCACCCCC AGTCCAAGTG AACTACACTC AGCTCCTCAT TGATGGAAAA 
    TTCGTTGATT CAGCATCTGG TAAAACTTTC CCAACTCTGG ACCCTCGTAC 
    CGGGGAGCTG ATTGCCCATG TGGCTGAAGG CGATGCGGAG GATATTAACC 
    GTGCGGTTCA TGCGGCCCGC AAGGCTTTCG ATGAAGGGCC ATGGCCAAAG 
    ATGACTGCCT ATGAGAGATC CCGGATTCTG TTGCGGTTTG CTGACTTGAT 
    TGAGAAGCAC AACGATGAAA TTGCTGCATT GGAGACATGG GACAACGGCA 
    AGCCGTATGC GCAAGCTGCC AACATTGAAG TGCCAATGGT GGCACGGCTG 
    ATGCGGTACT ATGCTGGTTG GGCTGACAAG ATCCATGGGC TTGTCGTGCC 
    GGCTGACGGC CCACACCATG TACAGGTGCT GCACGAGCCC ATTGGTGTCG 
    CAGGTCAGAT CATCCCATGG AACTTTCCGC TTCTGATGTT TGCGTGGAAA 
    GTTGGCCCTG CTTTGGCTTG TGGAAACACT GTTGTGCTCA AGACGGCTGA 
    GCAAACTCCT CTGTCTGCTC TATTTGCTTC TAAGCTGTTG CATGAGGCTG 
    GACTCCCAGA CGGTGTTGTT AACGTGGTAT CTGGTTTTGG ACCTACTGCT 
    GGTGCTGCTC TTGCTAGTCA CATGGATGTC GATAAGATTG CATTCACTGG 
    ATCGACCGAT ACTGGAAAAG TCGTCCTTGA GTTGGCTGCA AGGAGCAACC 
    TTAAGTCAGT GACACTGGAG CTAGGAGGCA AGTCTCCTTT CATCATCATG 
    GATGATGCTG ATGTTGACCA TGCTGTTGAG CTTGCGCATT TTGCACTGTT 
    CTTTAACCAG GGACAATGTT GCTGTGCTGG GTCTCGTACA TTTGTGCATG 
    AGCGTATCTA TGATGAGTTC GTGGAGAAGG CCAAGGCTCG TGCTCTCAAG 
    CGTGTGGTTG GTGATCCATT CAAGAATGGT GTTGAACAGG GCCCTCAGAT 
    TGATGACGAG CAATTCAACA AGATCTTGCG CTACATCAAG TATGGTGTTG 
    ACAGTGGAGC CAACCTTGTG ACTGGTGGCG ACAGATTAGG TGACAAAGGT 
    TACTACATCC AGCCAACAAT TTTCTCGGAT GTACAGGATA ACATGAGGAT 
    TGCTCAAGAA GAGATATTTG GCCCTGTGCA GTCCATTCTG AAGTTCAATG 
    ATCTGAACGA GGTCATCAAG AGGGCAAATG CAAGCCAGTA CGGGCTGGCT 
    GCTGGGGTCT TCACCAACAA CCTGAACACG GCCAACACCC TGACCCGCGC 
    GCTCAGGGTC GGGACCGTGT GGGTGAACTG CTTCGACGTC TTCGACGCCG 
    CGATCCCGTT CGGCGGATAC AAGCAGAGCG GCATCGGGAG GGAGAAGGGC 
    ATCGACAGCC TGAAGAACTA CCTGCAGGTC AAGGCCGTCG TCACGCCGAT 
    CAAGAACGCC GCGTGGTTGT AAACACATAG ATGTTTGGAC ATTTCAGAAC 
    TGGGGAAGAA ATAGGTATAA TCTTATGGAC GGATGCGAAA ATGGCGATAA 
    ATTATGGCGA TAAGATTATG ATGATGATGA TGAAGAAGAA GAAGAGGAGG 
    AGGAAGAACA GCTGAAATAA GCTTGTCCTA GCATGGGGCT GGCATTGTCT 
    CTAATAAACC TTGTGGTTGG TGCTCATGTT ACTGATGGAG TATATTGTAG 
    AAGCAGATTT ATGTTCATTA TGAAATATAT ATCGCTTGTT TGGG

    Gene models with high sequence identity

    1. AT1G23800.1 [+] show detail - aldehyde dehydrogenase 2B7
      E-value: 0; Score: 828.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D Aldehyde dehydrogenase, N-terminal 1.7e-110
    PatternScan Aldehyde dehydrogenase, conserved site 0
    PatternScan Aldehyde dehydrogenase, conserved site 0
    HMMPfam Aldehyde dehydrogenase 3.5e-184
    HMMPanther ALDEHYDE DEHYDROGENASE 2e-292
    HMMPanther Aldehyde dehydrogenase 2e-292
    superfamily Aldehyde/histidinol dehydrogenase 5.9e-191

    See the detailed result >

    AT1G23800.1

    Model type
    Protein coding
    Short Description
    aldehyde dehydrogenase 2B7
    Curator Summary
    Encodes a mitochondrial aldehyde dehydrogenase; nuclear gene for mitochondrial product.
    Computational Description
    aldehyde dehydrogenase 2B7 (ALDH2B7); FUNCTIONS IN: 3-chloroallyl aldehyde dehydrogenase activity, aldehyde dehydrogenase (NAD) activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: mitochondrion; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, LP.10 ten leaves visible, 4 leaf senescence stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Aldehyde/histidinol dehydrogenase (InterPro:IPR016161), Aldehyde dehydrogenase (InterPro:IPR015590), Aldehyde dehydrogenase, N-terminal (InterPro:IPR016162), Aldehyde dehydrogenase, conserved site (InterPro:IPR016160); BEST Arabidopsis thaliana protein match is: aldehyde dehydrogenase 2B4 (TAIR:AT3G48000.1); Has 60835 Blast hits to 60447 proteins in 2994 species: Archae - 474; Bacteria - 34339; Metazoa - 2649; Fungi - 2135; Plants - 1675; Viruses - 0; Other Eukaryotes - 19563 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR