K32638

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32638

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32638

Determination of introduced cDNA(s)

  • J013002L22 - Rice Full-length cDNAs - Original: J013002L22

    full reading [+] show sequence

    Nucleotide sequence: J013002L22 - full reading 
    GGCTTTGGTT CCTTCTTCTT CCATTCCATT GTGTTGATGA GTTGAGTTGG 
    CTCATCTCAT CGTCGCCGTC CTTGAATTGC CGCCTCCCAT CCCACGAATT 
    CCGCCCCTCC CACCCTCCTG AGATCTCTCT CTCTCCCCCA CCTCCGTATT 
    TAGGTAGGCG GCGGGCGCAT CACGTTCTAT TGCCCCCTCC TGCCCGCCGC 
    CGCCGCCGCA CAGCCGGCGA TCGAGCGGAA TTCCCATTCC TTTCCGCCCG 
    GTTTCCGGCG CTGCCGCCCC CCTCTTACCA TCCCGGGGGG GCCCAGAGGC 
    CAGGAGCTGT CGCCGGAGGA TTTCAATTTT TCGGAGCCAT TTGATGCTAA 
    TGCCACACCA CCACTCCTGC TAAAGCTGCC CTCATTATGA ACTCGCTGGA 
    CAATGAGTAG CAATTGCACA TTGCTGATTT CCATCTCCTG CGGTTACATT 
    CGTACACGAC AGCATGGGAA AACTTGCAGC TGTTGTTCGC AGTGTACTTA 
    GATTAACAAA TGAAAGCATG AGGATTGTTA TGGTAACAAT TATTGGAGTG 
    CTCTTGGGCT TCTTCATTGG AATTTCATTC CCATCAGTCA GCATAACAAA 
    GCTTCACTTT CCTTCTAGCT TTGTATCATA CATAGAAGAC AGAAACTCTG 
    GGCTCACTAC ACAAGCTTTG CTTAATCACG CCTGGACTTC CGCCCGAAAT 
    GCAAGGGAAA ACAGTTCTGA ACCAAGTTCA AACACTACTT TGAAGATTTA 
    TGTCCCAACG AACCCCAAGG GTGCAGAGAG ACTAGCACCA GCTATTGTTG 
    TGCCAGAAAC TGACTTCCAT TTGCGCAGGT TATGGGGAGA ACCAAGTGAG 
    GACCTGCCCT TCAAACCAAA GTACCTTGTT ACTTTCACTG TTGGATATGC 
    ACAGAAAGAA AATATCAACA GAGCAGTGAA GAAGTTCTCT GACAATTTTG 
    CTATTCTGTT GTTCCATTAT GATGGTCGGG TGAGTGAGTG GGACGAGTTT 
    GAGTGGTCGA AACGAGCCAT CCATATAAGT GCCAGGAAAC AAACTAAGTG 
    GTGGTATGCC AAAAGATTCC TGCATCCTGA TATTGTGGCA GCTTATGAGT 
    ACATATTCAT CTGGGATGAG GACCTTGGGG TGGAGCATTT CAATGCGGAG 
    GAATACATCA AACTTGTCAA GAAATACCAT CTGGAGATCT CTCAACCTGG 
    TTTAGAGCCT GATCGGGGAT TGACATGGCA GGTGACAAAA AGAAGAGGTG 
    ACCGCGAGGT CCACAAGGTT ACAGAGGAGA GGCCGGGCTG GTGTTCTGAC 
    CCTCATCTTC CGCCTTGTGC TGCCTTTGTT GAAATAATGG CTCCAGTCTT 
    CTCTAGAGAT GCATGGAGAT GTGTATGGCA TATGATTCAG AATGACTTGG 
    TTCATGGATG GGGCCTTGAT TTTGCTCTCA GGAAATGCGT GGAGCCTGCT 
    CACGAAAAGA TTGGGGTTGT TGATTCACAG TGGATTGTTC ACCAAGTGGT 
    TCCATCTCTC GGGAACCAGG GCAAGTCAGA GAATGGAAGA CCAGCATGGG 
    AAGGGGTGAG GGCGCGGTGC AGGAAGGAAT GGGGGATGTT TCAGACGAGA 
    ATGGCGGAGG CGGAGAAGGC GTACTACAAG ATGATGGGCA TCACCCCTCC 
    GAACTCCACA CTGGTGTAGA TCTAAGCTAG GCTGATTCTT CATCTTCATC 
    TTCACTCCCA TCTCTGCCTC TGTCTGAATG ACGAGGATTC TGATGTGTTT 
    TACCTGCTGT ACAGACAGTT CTGATGAACT GATGAGTGTG TAGGTAGGTG 
    GTCAGATAGA GTGTGGATTG GATGGTGATG ATTGTAGAGC ATACATTTAC 
    ACATGAGGGA GGGAGGGCCA TCGATCATGA GGAGGGTGTT ATACATACCA 
    TCTATAAAAT CGATTATTTT GTGTTTTTGT GGTGGT

    Gene models with high sequence identity

    1. AT1G67850.2 [+] show detail - Protein of unknown function (DUF707)
      E-value: 5e-159; Score: 558.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G67850.2

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF707)
    Computational Description
    Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR