K32912

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32912

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32912

Determination of introduced cDNA(s)

  • J013011A15 - Rice Full-length cDNAs - Original: J013011A15

    full reading [+] show sequence

    Nucleotide sequence: J013011A15 - full reading 
    GAAAGGCCCA TCACCTGCAT CGTTCCAAGC GCAGCTCAAT CTTTGCCTCG 
    TCAGGTTTTG CTCATTGGCG TCTCCATGGA TAGGCTCCTC GCCTGCCTCC 
    TTGGCTTCCT GTTGATCGCT TCAGTAGGAA GCCATGCCGC TCGGACTCCG 
    GAGCAATACT GGAAATCAGC TCTTCCCAAC TCTCCCATCC CGAGCTCGCT 
    CTCTCAGCTT CTCAGCACTG CAGGCGGAGG CACGTCGGTG AACGTCGGCG 
    GGGGCGGCGT CCATGTCGAC GCGGGGCACG GCAAGCCCGG CGGCACAACC 
    GTTGATGTAG GCAAGGGTGG CGTCGGCGTG AACGTGAAGC CTGGTTACGG 
    CAAGCCCGGC GGCACCACGG TCGGCGTCGG GAAGGGCGGC GTGGGAGTCA 
    ACGTCAAGCC TGGCTATGGC AAGCCCGGAG GCACCAGCGT CGGCGTCGGG 
    AAAGGAGGCG TGGGCGTGAA CGTGCAGCCT GGGTACGGCA AGCCCGGCGG 
    CACCACCGTC GGCGTCGGTA AGGGCGGCGT CGGCGTGAAC GTGCAGCCAG 
    GCTACGGCAA GCCCGGGGGC ACCACCGTCG GCGTCGGGAA GGGCGGCGTC 
    GGCGTCAACG TGAAGCCCCG GGGCAAGCCT GTCCACGTCA ACGTCGCACC 
    TTTCATCTAC AACTACGCCG CAACGGAGAC GCAGCTGCAC GACGACCCCA 
    ACGTGGCGCT CTTCTTCTTG GAGAAGGACC TCCACCCCGG GAAGACGATG 
    GCCGTACATT TCACGGCCAC CACCGCCGGA GAGAAGTTCC TCCCCAGGAG 
    CGAGGCCGAC GCCATGCCGT TCTCCTCCGA GAAGGTCCCG GAGATCCTCA 
    GCCGCTTCTC CGTGAAGCCG GGCTCCGTCG AGGCGGCGGA GATGGCGCAG 
    ACGCTGCGCG ACTGCGAGGC GCCGCCGGCG CAGGGCGAGA GGAAGGCGTG 
    CGCCACGTCG CTCGAGTCCA TGGTCGACTT CGCCACGTCG AGCCTCGGGA 
    CCAGCCACGT GAGGGCCGCG TCGACCGTGG TCGGGAAGGA AGGGTCGCCG 
    GAGCAGGAGT ACACCGTGAC GGCGGTGAAG CGCGCGGCGG CCGGCGGCGA 
    CCAGGACCAG CTCGTCGCCT GCCACGCGGA GCCGTACGCG TACGCCGTGT 
    TCGCGTGCCA CCTGACGCGG GCGACGCGGG CGTACGCGGT GTCGATGGCC 
    GGCAGGGACG GCACGGGCGT GGAGGCCGTC GCGGTGTGCC ACGCCGACAC 
    GGCCGGGTGG AACCCGAAGC ACGTCGCGTT CCAGGTGCTC AAGGTGAAGC 
    CAGGCACGGT GCCGGTCTGC CACTTCCTGC CGCAGGACCA CGTCGTCTGG 
    ACACGCAGCG GCTAGCTGAT GATCGGCTGC CAATCTTGGC GCCTGATCGA 
    GTTGGTTGCT TATGCTCTAG AATCTAGCTA GGCTCCATGC AGATGCTATA 
    CTGTATGGTG TCTTACTATC TTACATATTT GTATGCACGC AATTTGGTTC 
    TTTGTTATTT GGATGGTGTT GCCAGCATCG CCAGCCTGCT AGTAGATGAT 
    ACGGGTGGGC TTGCTGTTTG ATGTATAGTT TTAGCATGCG GGTGCAATAA 
    ACAGACAAGT ATTTACTT

    Gene models with high sequence identity

    1. AT5G25610.1 [+] show detail - BURP domain-containing protein
      E-value: 2e-72; Score: 270.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam BURP 4.8e-92
    ProfileScan BURP 93.053

    See the detailed result >

    AT5G25610.1

    Model type
    Protein coding
    Short Description
    BURP domain-containing protein
    Curator Summary
    responsive to dehydration 22 (RD22) mediated by ABA
    Computational Description
    RESPONSIVE TO DESSICATION 22 (RD22); FUNCTIONS IN: nutrient reservoir activity; INVOLVED IN: response to desiccation, response to salt stress, response to abscisic acid stimulus; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: BURP (InterPro:IPR004873); BEST Arabidopsis thaliana protein match is: unknown seed protein like 1 (TAIR:AT1G49320.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR