K32916

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32916

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32916

Determination of introduced cDNA(s)

J023143I03 - Rice Full-length cDNAs - Original: J023143I03

full reading [+] show sequence

GAAAGTGTAA AAATTCCTGC CACCCCAATC CTTCTCCCGG CCGTACACCA 
TTTCGTTCCG ACGCGAGTAA TTCCTCCCCA CGGGCGGCGA CTAGGGCGGC 
TAGGGTTCGT CGGGCGCCGC CGTGCCGGAG ATCGCCTCTC GCCGCCGACA 
CCCGGATCTC CGCCGCCGCC GGTCGCCCCA GGTTATCCCG CTCCCGCAGT 
CACCATCCCG TCTTCTCCGC CAGTCGCCTC ACGCCCGGCC TGGACGCCCC 
GGAATCCATT GTCGGTCTCG CCCCGCCGAC TGCCGTTGAC GCCACTGGCT 
GAAGGTGTGA ATATGTCGGA CAGTGCGTTG AAAGATCTGA ATCTAGCTCA 
GTCAGCAGAG CTGGAGAAAA CCAAGGACAG TTCTGCCAAG TCTTGCATCA 
CCAAGCCTGT CTTGAATGGC AACAAATGCA ACAATACGGA AGAAAATGCT 
CCACCTGTAC TCCCTGATGC TGTGACTAAT GGGTGTGAAG CTGGAAATGC 
AGATGTTGAG TATATTGATT CTGAGAGTCT GACAGATCTT GAAGATGCTG 
GTGCAACCCT TAGTACTTTA GTTGCAAGGT TGGATTCAAA AGACTGGGTT 
ATGACATGTG AAGCTCTAAA TAATGTTCGT CAGTTGGCAA TATTTCACAA 
GGATAGATTG CAGGAACTTC TAGAGCCTCT AGTTCCTCTT ATTGTGAAAT 
CTGTCAAGAA TCCAAGGAGT GCTGTCTGTA AAACCACACT CATGACCTGC 
GCTGATATTT TCAAGGCATA CGGTGACCTA ATGGTTGACT CAATTGATCC 
ACTGTTAGTG CAGCTATTTC TGAAATCTTC ACAAGATAAG CGTTTTGTCT 
GTGAAGCTGC TGAGGCAGCC CTCATATCGA TGACAAGCTG GATCGCCCCT 
TCTGCTCTGT TACCAAAAAT GCAACCTTAC CTTAAGAACA GGAATCCACG 
AATTCGAGCA AAAGCATCAA TGTGCTTCAG CAAGAGCGTC CCACGCTTGG 
GTGTGGAGGG AATTAAAGAA TATGGAATGG ATAAGCTTGT TCAGATCGCA 
GCAACTCAGC TTAGTGACCA GCTTCCTGAA TCCAGGGAGG CTGCTCGCAA 
GCTGGCTTTG GAGCTACAAG CATTCTATGA GAAATCCCAA GCTTCGAGTT 
CTGGTGAAGT TGACGACGCA CCTGCTACCT CACCTGATGC TGATGCTGAT 
GCTGGTGCTG AATCATGGGA AGCTTTCTGC CAATCAAAGC TTTCCCCATT 
AAGTGCACAG GCAATCCTTC GTGTCACCTC TACGACGAAA GAGGGTGTGG 
CTGTGGGTGT CACCTCTACC CCTCCGAAAG AAGGCGTCAC TGTTGGTTGC 
TAGCATCAGG AGGTAGTAGA TGCAATGAGG TTGTGGTTTT TCCATCCGAT 
TCACCTTTTG CTGTACATGG TTATGGTTGT TCTTTCTCTA CATCCAATCT 
GGGATTCGTT CGTTAAGCAT CGGTTCGAGA GTTGAGGTGT GACCTGTGGG 
TGTTAATATT GGTGCGAGAT ATACCTGTTA TAGTTGACTG TATGATCTTC 
CTTTTCTCCC ACTGCTTGGT ATTGATTGGT CAGGCGAATT GTAGAATTTC 
TTCCACTATT CAATATTACT ACACAGTAAT TTTTCC

Gene models with high sequence identity

AT5G14790.1 [+] show detail - ARM repeat superfamily protein
E-value: 1e-91; Score: 334.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Armadillo-type fold	1.9e-17
HMMPanther	CLASP	1.5e-44
HMMPfam	CLASP_N	1.1e-07

See the detailed result >

AT5G14790.1

Model type: Protein coding
Short Description: ARM repeat superfamily protein
Computational Description: ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT3G01450.1); Has 322 Blast hits to 322 proteins in 81 species: Archae - 0; Bacteria - 0; Metazoa - 157; Fungi - 10; Plants - 125; Viruses - 0; Other Eukaryotes - 30 (source: NCBI BLink).
Link: InterPro Scan - TAIR