K32927

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32927

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32927

Determination of introduced cDNA(s)

  • J033095G20 - Rice Full-length cDNAs - Original: J033095G20

    full reading [+] show sequence

    Nucleotide sequence: J033095G20 - full reading
    GGCTCACCAC CTGCCTCGGC ATCCTCGTCG CCGACGTCAT CAACTACTTC 
    ACCGACAAGA TCCACCCGTG GGGGTGGAGG CTGTCGCTGG GGCTCGCCAT
    GGGCCCCGCC ACCGCGATCT TCGTCGGCGC GCTGTTCTTG CCGGAGACGC
    CCAACAGCCT CGTCGAGATG GGGCGGCTGG AGGAGGCGAG GCGGGTGCTG
    GAGAAGGTGA GGGGGACGAG GAAGGTGGAC GCCGAGTTCG AGGATTTGAG
    GGAGGCGAGC GAGGCGGCGA GGGCGGTGCG CGGCACGTTC AGGAGCCTGC
    TCGCCGCGCG CAACCGGCCG CAGCTCATCA TTGGGGCGCT CGGGATCCCG
    GCGTTCCAGC AGCTGTCCGG GATGAACTCC ATACTCTTCT ACTCGCCGGT
    CATCTTCCAG AGCCTCGGCT TCGGCAACTC CGCCGCGCTC TACTCCTCCA
    TCATCACGGG ATCCATGCTC GTCGTCGGCG CGCTCGTCTC CATGGTCGTC
    GTCGACCGCC TCGGCCGCAG ATTCCTCTTC ATCGAGGCCG GCATCCAGAT
    GATCTCCTCC ATGGTGGTGG TGGCGGTGAT CCTGGCGCTC AAGTTCGGGC
    ACGGCGAGGA GCTATCGAAG GGCGTGGGCA CGGTGCTGGT GGTGGCGATC
    TGCCTGTTCG TGGTGGCCTA CGGGTGGTCG TGGGGGCCGC TGGGGTGGCT
    GGTGCCGAGC GAGCTGTTCC CGCTGGAGAT GAGGTCGGCG GGGCAGAGCG
    TGGTGGTGTG CGTCAACCTG TTCTGGACGG CGGCGGTGGC GCAGTGCTTC
    CTCGCCGCCA TGTGCCACCT CCGGTGGGGG GTGTTCATCC TCTTCGCCGC
    GCTCATCGTC GTCATGTCCA TCTTCGTCAT CCTCCTCCTG CCGGAGACCA
    AGCAGGTGCC CATCGAGGAG ATCTGGATGC TCTTCGACAA GCACTGGTAT
    TGGAAGCGCA TCGTCAGGAA GGACCCCAAG TATCAGGGCC ACCACCACCA
    CCAGATGGCC GCCATGCCAA CCGCCGCCGC CAAGTCCGGC TCGTCGGAGG
    TTTAGATGAT GATGATAATG AATTGATGAT GGTTTAATAA GGTTTTAGTG
    GGTGGTGATT AAGACTTGAT CTTGAATTGT TCATGTGGCA GTAGCTTTTT
    TGATCTTCGA TTGATGCAAA AGAAGAGGTC AGAGGGTTAA TGCATGTGTG
    TGCTCGTGTG TCTATAGTTT TAGTCATGTT CTTCAGAATT CGATTCAGTG
    TAGTGGTGGG CTGATTAATG GATCTTGATG ATGC

    Gene models with high sequence identity

    1. AT1G77210.2 [+] show detail - sugar transporter 14
      E-value: 3e-124; Score: 442.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Major facilitator superfamily, general substrate transporter 7.9e-34
    PatternScan Sugar transporter, conserved site 0
    HMMPfam General substrate transporter 1.2e-76
    ProfileScan MFS 25.67
    HMMPanther MONOSACCHARIDE TRANSPORTER, PLANT 1.4e-91
    HMMPanther SUGAR TRANSPORTER 1.4e-91
    FPrintScan Sugar/inositol transporter 0.0000000000000026
    FPrintScan Sugar/inositol transporter 0.0000000000000026
    FPrintScan Sugar/inositol transporter 0.0000000000000026

    See the detailed result >

    AT1G77210.2

    Model type
    Protein coding
    Short Description
    sugar transporter 14
    Curator Summary
    AtSTP14 belongs to the family of sugar transport proteins (AtSTPs)in volved in monosaccharide transport. Heterologous expression in yeast revealed that AtSTP14 is the transporter specifc for galactose and does not transport other monosaccharides such as glucose or fructose.
    Computational Description
    sugar transport protein 14 (STP14); FUNCTIONS IN: galactose transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1).
    Link
    InterPro Scan - TAIR