K32927

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K32927

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K32927

Determination of introduced cDNA(s)

  • J033095G20 - Rice Full-length cDNAs - Original: J033095G20

    full reading [+] show sequence

    Nucleotide sequence: J033095G20 - full reading 
    GGCTCACCAC CTGCCTCGGC ATCCTCGTCG CCGACGTCAT CAACTACTTC 
    ACCGACAAGA TCCACCCGTG GGGGTGGAGG CTGTCGCTGG GGCTCGCCAT 
    GGGCCCCGCC ACCGCGATCT TCGTCGGCGC GCTGTTCTTG CCGGAGACGC 
    CCAACAGCCT CGTCGAGATG GGGCGGCTGG AGGAGGCGAG GCGGGTGCTG 
    GAGAAGGTGA GGGGGACGAG GAAGGTGGAC GCCGAGTTCG AGGATTTGAG 
    GGAGGCGAGC GAGGCGGCGA GGGCGGTGCG CGGCACGTTC AGGAGCCTGC 
    TCGCCGCGCG CAACCGGCCG CAGCTCATCA TTGGGGCGCT CGGGATCCCG 
    GCGTTCCAGC AGCTGTCCGG GATGAACTCC ATACTCTTCT ACTCGCCGGT 
    CATCTTCCAG AGCCTCGGCT TCGGCAACTC CGCCGCGCTC TACTCCTCCA 
    TCATCACGGG ATCCATGCTC GTCGTCGGCG CGCTCGTCTC CATGGTCGTC 
    GTCGACCGCC TCGGCCGCAG ATTCCTCTTC ATCGAGGCCG GCATCCAGAT 
    GATCTCCTCC ATGGTGGTGG TGGCGGTGAT CCTGGCGCTC AAGTTCGGGC 
    ACGGCGAGGA GCTATCGAAG GGCGTGGGCA CGGTGCTGGT GGTGGCGATC 
    TGCCTGTTCG TGGTGGCCTA CGGGTGGTCG TGGGGGCCGC TGGGGTGGCT 
    GGTGCCGAGC GAGCTGTTCC CGCTGGAGAT GAGGTCGGCG GGGCAGAGCG 
    TGGTGGTGTG CGTCAACCTG TTCTGGACGG CGGCGGTGGC GCAGTGCTTC 
    CTCGCCGCCA TGTGCCACCT CCGGTGGGGG GTGTTCATCC TCTTCGCCGC 
    GCTCATCGTC GTCATGTCCA TCTTCGTCAT CCTCCTCCTG CCGGAGACCA 
    AGCAGGTGCC CATCGAGGAG ATCTGGATGC TCTTCGACAA GCACTGGTAT 
    TGGAAGCGCA TCGTCAGGAA GGACCCCAAG TATCAGGGCC ACCACCACCA 
    CCAGATGGCC GCCATGCCAA CCGCCGCCGC CAAGTCCGGC TCGTCGGAGG 
    TTTAGATGAT GATGATAATG AATTGATGAT GGTTTAATAA GGTTTTAGTG 
    GGTGGTGATT AAGACTTGAT CTTGAATTGT TCATGTGGCA GTAGCTTTTT 
    TGATCTTCGA TTGATGCAAA AGAAGAGGTC AGAGGGTTAA TGCATGTGTG 
    TGCTCGTGTG TCTATAGTTT TAGTCATGTT CTTCAGAATT CGATTCAGTG 
    TAGTGGTGGG CTGATTAATG GATCTTGATG ATGC

    Gene models with high sequence identity

    1. AT1G77210.2 [+] show detail - sugar transporter 14
      E-value: 3e-124; Score: 442.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Major facilitator superfamily, general substrate transporter 7.9e-34
    PatternScan Sugar transporter, conserved site 0
    HMMPfam General substrate transporter 1.2e-76
    ProfileScan MFS 25.67
    HMMPanther MONOSACCHARIDE TRANSPORTER, PLANT 1.4e-91
    HMMPanther SUGAR TRANSPORTER 1.4e-91
    FPrintScan Sugar/inositol transporter 2.6e-15
    FPrintScan Sugar/inositol transporter 2.6e-15
    FPrintScan Sugar/inositol transporter 2.6e-15

    See the detailed result >

    AT1G77210.2

    Model type
    Protein coding
    Short Description
    sugar transporter 14
    Curator Summary
    AtSTP14 belongs to the family of sugar transport proteins (AtSTPs)in volved in monosaccharide transport. Heterologous expression in yeast revealed that AtSTP14 is the transporter specifc for galactose and does not transport other monosaccharides such as glucose or fructose.
    Computational Description
    sugar transport protein 14 (STP14); FUNCTIONS IN: galactose transmembrane transporter activity, carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), General substrate transporter (InterPro:IPR005828), Sugar/inositol transporter (InterPro:IPR003663), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sugar transporter protein 7 (TAIR:AT4G02050.1).
    Link
    InterPro Scan - TAIR