K33103

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33103

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33103

Determination of introduced cDNA(s)

J033149M20 - Rice Full-length cDNAs - Original: J033149M20

full reading [+] show sequence

GCACTTCTCC CACCGCCGCC GCCGCCGCCG CCGAGGAAGA AGCTCTGCTC 
CGCCATGGCC GGCGACGCGC TGCGTGCGGC CGATCTCCCC GGCCGAGGAC 
GCGGGCTCCT CGCGGCGCGC AGCATCCGGG AGGGGGAGGT CATCCTCACC 
GAGCAGCCGC TGCTCCTCTA CCCGGCCTCG CTCGCCTCCC TCCCCTCCTT 
CTGCTCCGCC TGCTTCCGCT CCCTCTCCGC CGCCGCATCC CCCTGCCCCT 
CCTGCCGCGC CGCGGGATTC TGCTCCCCGT CCTGCGCCGC CGCCTCCCAC 
CCGCGCCTCC TCTGCACCGC GCTCTCCGGC GGCGGTGGCA ACGGAAACCT 
CGCGTCCGCC GCCGAGCCGC ACCAGGAGCC GCTCCTCTTC CTTCTCTCCG 
CCTACTCCCT CCCGGAGCCC TCACTCCGCA TGCTCCTCTC CCTCTCCTCC 
GCCGCAACGC CGCCCCCGAG CGACCAGGAC CCGGGGAGCC TGCACGCCAT 
GGTGGCGGCG CTGGTGCCGC CGCAGATGCT TCCGCCAGGG TTCTCGCCGG 
ACCTCACGGC GGCGCTCCTC TCCAAGGACC GGACCAACAG CTTCTCCATC 
ATGGAGCCCT ACCGCCCCGA GGTGCCGCAG CCTCTCCGGA AGGCGAGGGC 
CTACGCCGTG TACCCGCGGG CGTCGCTGCT GAACCATGAT TGCCTCCCCA 
ATGCTTGCCA TTTCGATTAC GCCGATAGGC CGGGTCCCGG GAACACCGAC 
ATTGTGGTGC GAGCTCTTCA CGACATCACC GAGGGGAGGG AGGTGTGCCT 
CAGCTACTTC GCGGCCAATT GGCAGTACAA GGATCGGCAG CAGAGGTTGC 
TGGAGGACTA TGGGTTCCGA TGCGAGTGTG AGCGGTGTCA GGTGGAGAGC 
AAGTGGAAGC AAGATGATGA TAGCGATGGC GGCGATGGGG ATGACACCAT 
GGAAGAGGAG GAAGAGGATG GTAATGGTGG AGAAGGTGGT GATGATGGGA 
TGGAGCAGGA GGAGGGGGAT GGTGGTAGCG ATAGCGATGA TGATTTCCCG 
CACTCATACT TCTTTGTAAG GTATCTGTGT AACCATGGTG AATGCTATGG 
CATGCTTGCG CCACTTCCGC CCTTGCCAAA CGGTGAGCCG TCCCATGTGT 
TTGAGTGCAA TGTCTGTGGG AACCTGAAGA ACGAAGATGA AATTGATGCT 
CCTGATGGTG GTGATTCCAG CATGGCGGAT TAGGATGAGC TAAGCATAAC 
CGATCTGCTT GCTGCTTCTT TTGGTGGGAG CTCATAACAC TTTGGTGGTA 
GGACTTGGGA GTACTTCTGT AAACTGGTTG GAGTTTTGAC AAAAACGGGA 
GTTTAATACA CCTAAATATG GAGAGATGTA TGAACAGAAC AACATTCATT 
GACTGAATGT GGAACTAGCA ATCCTTCTTG TACTCAGCAA CGTATATATG 
AATGTGTATC CGTTGTAGGG AGTCCTGCTT GTTCTGTACA ATTTCTAATG 
CTCCCCCTTT ATCTAGAATG GTGATTTAGA CTTGAGAAAT TTATGCAGTC 
AGAAGCTGAT CTCCTGTGAT ACTTG

Gene models with high sequence identity

AT2G19640.2 [+] show detail - ASH1-related protein 2
E-value: 4e-67; Score: 252.00

InterPro Scan Digest

Program	Description	E-value
ProfileScan	SET domain	8.936
superfamily	SET domain	9.4e-22
HMMPanther	SET AND MYND DOMAIN CONTAINING	2.4e-32
HMMPanther	SET AND MYND DOMAIN CONTAINING	2.4e-32
HMMPfam	SET domain	1.5e-06
HMMSmart	SET domain	1.9e-09

See the detailed result >

AT2G19640.2

Model type: Protein coding
Short Description: ASH1-related protein 2
Computational Description: ASH1-related protein 2 (ASHR2); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214); BEST Arabidopsis thaliana protein match is: SET domain protein 38 (TAIR:AT5G06620.1); Has 1755 Blast hits to 1733 proteins in 213 species: Archae - 0; Bacteria - 0; Metazoa - 753; Fungi - 380; Plants - 323; Viruses - 3; Other Eukaryotes - 296 (source: NCBI BLink).
Link: InterPro Scan - TAIR