K33151

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33151

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33151

Determination of introduced cDNA(s)

  • J013008B02 - Rice Full-length cDNAs - Original: J013008B02

    full reading [+] show sequence

    Nucleotide sequence: J013008B02 - full reading 
    GGAATCTCCG CCACACCACA TCCCGGCCGC GCCCCCGGCC TCGCGGGCGT 
    GTCACCCGGA GACTGAGCGC GCGGCGCCGC GTTGGAGTCA CGCCACGCCA 
    TGGAGAGAAC CGTGGTGCTG TATCCCGGCC TCGGCGTCGG CCACCTGGTG 
    CCGATGGTTG AGCTGGCCAA GGTGTTCCTC CGCCACGGCC TCGCGGTCAC 
    CGTGGCAGCC GTCAAGCCGC CACTCGACTC TCCCGATTTC TCCGCCGCTG 
    TCGCGCGCTT CGCGGAGTGC AACCCCGCCA TCAACTTCCA CGTGCTGCCG 
    CCGCCGCCGC CACCGCCCGC GCCCGTGGGC TCCGGCTCCG ACGGCAAGTC 
    CGCGTCCCCG ATCGTCGGTA TGCTCGGGTT CCTCAACGCC ATGAACGCGC 
    CGCTCCGCGA CTTCCTCTGC TCGCTGCCCT CCGTGGACGC GCTCATCGTC 
    GACATGTTCT GCACGGACGC TCTCGACGTC GCCTCCGAGC TCAGGTTACC 
    GGTCTACGTT TTCTTCACCT CGGCCGCCAG CGACCTCGCC GTCTTCCTCC 
    ACCTAACCAG CATGCGAGAT AGCATCAACA CAAGCTTCGG GGAGCTCGGT 
    GACTCCATGA TCCACATCCC GGGCTGTCCT CCGTTCAAAG CTTCAGAGTT 
    ACCATCAGAT ATTCTCAGTG ACAACGAAGC ATCCAGGCTT ATCTTACTGA 
    TGTTCCGTCG GCATCCAGAG TCGAGAGGAA TTCTTGTCAA TACATTCGAG 
    TCGCTGGAGA CGCGCGCGTT GCGCGCTCTG GAGGACGGGC TCTGCGTCCC 
    CGGCCGTGCC ACGCCGACGG TCTACTCCAT CGGGCCAATC GTCTCGGGTG 
    GCGGTGGCAG CGACAAGGAT CACGACTGCC TCCGGTGGCT GGACGCGCAG 
    CCGGACAACA GCGTGGTGTT CCTCTCGTTC GGGAGCTTGG GAAGGTTCTG 
    CAAGAAGCAG CTCGAGGAGA TCGCCATTGG CCTGCAGAAG TCGGAGAAGA 
    GGTTCCTCTG GGTCGTGCGG AGCCCGCGCA TCGACGAAAA GAACGTGTTC 
    GAGCCGCTGG CGGAGCCAGA CCTCGACGCG CTCCTGCCGG CCGGGTTCAT 
    GGAGGCGACA AGGGGGAGAG GGCTCGTGGT GAAGCTATGG GCGCCGCAGG 
    TGGAGGTGCT CCGCCACAGG GCGACCGGCG CGTTCGTGAC GCATTGCGGG 
    TGGAACTCGA CGCTTGAGGG GATCACGGCG GGGCTGCCGC TGCTGTGCTG 
    GCCGCTGTAC GCGGAGCAGA GGCTGAACAA GGTGTTCGTC GTGGAGGAGA 
    TGAAGCTTGG CGTGGAGATG AGGGGCTACG ACGAGGAGGT GGTGGTGGCG 
    GAGGAGGTGG AGGCGAAGGT CAGGTGGGTG ATGGAGTCCG AGGGCGGCCA 
    GGCGCTCAGG CAGCGCGCGG CCGCGGTGAA GGATGCGGCG GCCCAGGCGA 
    TCAAGGAAGG GGGCTCGTCT CATGCCGCGT TTTTCAAGTT CCTCGAGGAC 
    CTGCCGCTGC AGGTCTCCAG AGGCATGGTT AGTGCATGAT TTCGAGCCAT 
    GGTAATTTGT CGGGCACTGT GTTTACCTGC GACTGTGAGC AACATAATTT 
    GAGTACTGTA TGGTTCTCTT AGGATTGGAT AATGGATGTT CTTTCTG

    Gene models with high sequence identity

    1. AT3G16520.3 [+] show detail - UDP-glucosyl transferase 88A1
      E-value: 2e-75; Score: 280.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 0.000000000021
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 4e-25
    HMMPanther UDP-GLUCOSYLTRANSFERASE 2.8e-118
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 2.8e-118
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 2.5e-46
    PatternScan UDP-glucuronosyl/UDP-glucosyltransferase 0

    See the detailed result >

    AT3G16520.3

    Model type
    Protein coding
    Short Description
    UDP-glucosyl transferase 88A1
    Computational Description
    UDP-glucosyl transferase 88A1 (UGT88A1); FUNCTIONS IN: in 6 functions; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-glucosyl transferase 72B3 (TAIR:AT1G01420.1); Has 7523 Blast hits to 7470 proteins in 455 species: Archae - 0; Bacteria - 255; Metazoa - 2062; Fungi - 26; Plants - 5000; Viruses - 120; Other Eukaryotes - 60 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR