K33202

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased length (PATO:0000573) (Seed::Shape::long) decreased width (PATO:0000599) (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33202

Determination of introduced cDNA(s)

J023099K10 - Rice Full-length cDNAs - Original: J023099K10

full reading [+] show sequence

GGGGTGCACA TGACACGACT GCTTCCGCGT TTCTTCTCGG CGACGCACCC 
CACACACGCA CACACACACC TCCATTCGCT CCCCGCCACA CAACACGAGA 
AACCCCCCAC CCTTCGCTCG CCGCCGCCGC CGCCGCCTTC CGCCGCCTCG 
AACCGGACCA ACCAACGACG GCTCGCTTCC CTCCGAGGCG GTAGGCCACC 
TCCTCCCGGC GGCTCCCCCA TCTGGCCGCC CGGCGCCGAG CTGGGGATCC 
ATCCGCCCGC GATTCCTCTC GCCGGTTTGC TCTCCATTGC CAGCTGCCGG 
TGGCCATGGA TGACGGGGAC CTCGATTTCT CCAACCCGGA CACATTCCTC 
TGCCCGGCCG TCGGTGGTGC TGACCCCGAC GGCAGCTGCT CCATGGACAG 
CTATTTCGAC GACATCCTCA AGGATACGGA GCACCATGCA TGCACCCACA 
CCCACACCTG CAACCCGCCT GTGCATGACC TCTCACACAC CCACACCTGC 
GTCCATGTCC ACACCAAGAT CGTCTCCGCC CCATCCGACA CTCCGTCGGA 
TGCTGCCGAG ACCGCCGAGT CCCCGACGGA GAACAATGCC TCCAAGAAGC 
GGCCGTCGGG TAACCGTGCC GCTGTGAGGA AGTACAGGGA GAAGAAGAAA 
GCTCACACTG CCTCGCTGGA GGAGGAGGTT GTTCATTTGA GGGCTCTAAA 
CCAGCAGCTC ATGAAGAAGC TCCAGAACCA TGCCACGCTC GAGGCAGAGG 
TATCCAGGCT GCGGTGCCTG CTCGTTGATA TTAGAGGAAG GATTGAAGGG 
GAGATTGGGG CTTTTCCTTA TCAGAGGCCA GTGAAGAACA TCGATTTGGT 
TTCTAGTGTT GATCAGGGAA GTTATCTTGG TGGTGCCCAG GTTATGAACT 
CCTGTGACTT TCGATGTGCC GACCAGATGT ATTGCAGTCC AGGGATGCAG 
GTGAGAACAA TGGGCGAGGA TGGCGCTGTG AGTGGTCAGG TGTTGGGGCA 
AGGTGCCTGT GATATTGCCA GTATCCAATG CCAAGGTGCA AAATCTGGAT 
CTGCAAAGCT CCCAGTCTGT GGGGCTATGG GTACGATGCC TGTCGGCTGT 
ATGCCAAATT CTGAAAAGAA ATGAAGGATC CCCATCGCCA AGACTTCAAG 
TCAGGGCATT CAAGAAACAT CGCATAAATT GCTAGCGTCT ATCTCTAGGA 
ATGTGTGTGA TTCTGTCGCC GATGATGCTT CCACAGTGCC TGAGGCGATT 
TAAGTTCGTT AGCTATGAAG CTATCAGTAT GTCCTCTAGT TTGCTTAGCT 
TTCCCTCCGT TTTTTTCTTG ATGTTGGAAA TGGACAATAT TGCTGCTAGT 
GACTCCCAAA TGCTCCCTGA TAAAAAACTT AAAGATTCAG CATCATTGTT 
TTATGCCAGG ATACATGTCC AGATTTGGCT AGGCCTCAAG TTTTGATGTG 
AATCTCTTGT AAATACATCA TGTATGAAAT CTTTGTAGTA ACATGGATTC 
AATCATTGTT TGGATGTTCC

Gene models with high sequence identity

AT4G35040.1 [+] show detail - Basic-leucine zipper (bZIP) transcription factor family protein
E-value: 5e-54; Score: 209.00

InterPro Scan Digest

Program	Description	E-value
HMMSmart	Basic-leucine zipper (bZIP) transcription factor	2.8e-08
HMMPfam	Basic leucine zipper	3.7e-14
Gene3D	no description	0.00065
Coil	coiled-coil	0

See the detailed result >

AT4G35040.1

Model type: Protein coding
Short Description: Basic-leucine zipper (bZIP) transcription factor family protein
Curator Summary: Basic-region leucine zipper (bZIP19) transcription factor involved in the adaptation to zinc deficiency. Binds ZDRE motifs.
Computational Description: bZIP19; FUNCTIONS IN: protein binding, DNA binding, sequence-specific DNA binding transcription factor activity; INVOLVED IN: cellular response to zinc ion, response to zinc ion; LOCATED IN: nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), Basic leucine zipper (InterPro:IPR011700); BEST Arabidopsis thaliana protein match is: Basic-leucine zipper (bZIP) transcription factor family protein (TAIR:AT2G16770.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR