K33307

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33307

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33307

Determination of introduced cDNA(s)

  • J023067L05 - Rice Full-length cDNAs - Original: J023067L05

    full reading [+] show sequence

    Nucleotide sequence: J023067L05 - full reading 
    GACGCACAAA CAAACGCCAA AAATCGCCGA GAAGAATCCG GAGAAAACCT 
    CACGGCGGCG GCGGCGACCG GCGACCAGAA TCGGCGAACG GGCACGGGCC 
    GAGCAGATCT AGGCGAGGGA GGGAGCGATG GGGTCGAGCG AGATGACGGC 
    GACGGAGGTG GCGGCGCTGC TGGATCTGAA GCCGCACCCG GAGGGCGGCT 
    ACTACACCGA GACGTTCCGC GACGGCTCCG TCTCCGTCAC CACCGCGCAG 
    CTCCCGCCGC AGTACAAGGT CGACCGTGCT ATCAGCACTG CTATCTACTT 
    CCTGCTTCCA TCAGGGAGTG TTTCTCACCT CCATCGCATT CCCTGTGCTG 
    AAACATGGCA CTTCTACAAG GGAGAGCCTC TCACGGTCTT TGAGCTACAC 
    GATGATGGAC ACATTGACCT CACTGTCATC GGTCCACACC TGGAGGCTGG 
    CCAGCGTCCC CAGTATACCG TGCCACCAAA TGTGTGGTTC GGTTCTTTCC 
    CTACCCTGGA TGTTGAATCA TTCGCATCTG ATGGCAGCGT TCTTGTCAAG 
    TCTCGAAAGA GGGATCCTGA GCTTCATTAC TCCCTAGTTG GCTGCACTTG 
    TGCCCCTGGC TTCCAGTATG AGGATTTCGA AATGGCCAAT TTTGATGATG 
    TGAAATCCAT TGCTCCTAAG GCAGAACCGT TCCTCAAGTA CCTTATTCCT 
    TCCACCAAGT AATCATGTTT TGAGCTCAAC ATACTGTATT TTAGCAGCCT 
    GTCTGGCAAG ATTGCCTGAC GGTATTGGAC GCCATTTTTA GTGTGATTGC 
    TTCGGGTTTG TGTTCTTGTC TTGTACACTT AAGAACACGC ATGTCCTTGG 
    TGATAGTTGT AACACTCTCC TGTACGAAAA CAGAATAAAA CACTGGCAAT 
    GTTGAGATGA AATTTGCTTG

    Gene models with high sequence identity

    1. AT1G19130.1 [+] show detail - CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF985 (InterPro:IPR009327), RmlC-like je...
      E-value: 6e-63; Score: 238.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF985 6.5e-49
    Gene3D RmlC-like jelly roll fold 4.4e-48

    See the detailed result >

    AT1G19130.1

    Model type
    Protein coding
    Computational Description
    CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF985 (InterPro:IPR009327), RmlC-like jelly roll fold (InterPro:IPR014710); Has 1465 Blast hits to 1465 proteins in 584 species: Archae - 10; Bacteria - 1038; Metazoa - 19; Fungi - 43; Plants - 51; Viruses - 0; Other Eukaryotes - 304 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR