K33315

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33315

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33315

Determination of introduced cDNA(s)

J013157I01 - Rice Full-length cDNAs - Original: J013157I01

full reading [+] show sequence

TTTCCGATCT TCTTCTTCTT CCCCCAAAAA TCTAATTAAA ATCCCCTCCC 
CCAAAAACCC CTCTCACCCG AATTTCCTCA TGGACTCGGT GCCGGCCGCC 
GGAGTCGGCG TCGGCGGCGG CGGCGCGGGC GCGGGCTACC CGTAGTCCAC 
GGAGTCATCC CCACGCAGCC GGGGCGGCGA CTCGTGGGAC GAGCCCTTCC 
CTTCCTCCGC CGCGGCGGCG GCCGCGGCTG CCGGGGGAGG GAGGCTCCGC 
CTCATGTGCA GCTTCGGCGG GCGGATCGTG CCGCGCCCCA CGGACAAGTC 
GCTGTGCTAC CTCGGCGGGG AGACCCGGAT CGTGGCCGTC GAGCGGAACG 
CCTCGCTGGC CGACGTCCAC GCGCGGCTCT CCCGCTCGCT CCTCGGCGGC 
CAGCCGTTTA CTCTCAAGTA CCAGCTCCCC AACGAGGACC TCGACTCGCT 
CATCTCGGTC TCCACCGACG AGGACCTCGA TAACCTCGTC GACGAGTACG 
ACCGCATCGC CGCCACCTCC TCCGGCGGCG GCTCCTCCCG CACGTCGCGG 
ATCCGCCTCT TCCTCTTCCC GGCCAAGCCC GAGTCATCCT CCTCCCTCGG 
CTCCCTCCTC GACGACTCCT CCAAGTCCGA GTCATGGTTC GTCGACGCCC 
TCAACAGCGC CATCTCCGGC TCCCTCGACG GCATCCCGCG CGGGATCTCC 
ACCGACTCCG CCTCAGTCAA CTGCCTCCTC GGCCTCGAGG ACGACTCCTC 
CACGCACTCC CGCGGCGGCC CGCCTAACTC TTCTCCCGCC GAGGAACAGC 
GCGCCAACCA GCAGAAGCTC GCCGCGGCCG CGGCCGTTGC TGCGGCGAGG 
CACCCGCACG ACGTGCAGTC CGTGCCGGAC TCGCCGATGA TTGACAAGAA 
CTCCTCGTTC GGATCAACGT CCTCTGCGCC ATCGCTGTCG AATCTACCGC 
CGATACGGGT GCGGCCCGAG GATCGCCCGC CGGATAGCCG ACTCGCCCCG 
CAGGTTCCCG TTGAGGATCA CTTCGCCCAG ATGGGGATCT CCGATCAGCC 
GGTGCAGCCT GTAATTGGGG GATACATGCA GCCGCCGCCA CAGGTGCCGA 
TCCCCAACAT GGCTGTCCCC AGCATCTCCC CCTCGGATGC GTCCAGCCGA 
GTGTTCTCCG ACGATGACAA GTCAGATCAC GGCGGCGGCG GAGGTCGGAA 
GCCGCAGCCA CCCAAGCCGG AGGTTCCACC TGTCGCTGAC CCCACCAACA 
GAGCCATGTA CTACAACGAT AGATCGCCTC CTGCTGAATT GAAGCGTGAC 
ATGCCGGTTG GAACTGATGC TGCCAGCTAT CGTGTGCCTG TGCCAGCCCA 
AGATGCTGCT GCCGCCGCCG CCGCTGCGGC TGCTGCTGCC CAGCAACCCC 
CAGCTGGGTA TGTGTATGCA CAGATGCATG CGCCGCCACC GCAGCAGCAA 
CCCCCACCAC CACAGCAGCA ACAGCCAGTC CCACAGCAAT ATGTCACTGC 
ACAAAATCAG CATTTCATTC ACAATCCAGC TACTGGCACA TTCATCCCAA 
TCCAATCCTA TTACCACCAT CCGGTCCCTC AGCAAGCACC ACAGCCGCCC 
ATGCCGCAGC CTGTGCCACA GCCACAACAA TCACACGCTT TCGACCCAAA 
TACTGGCATG TATTACATTC CCATGCGCAC GAATGCGCCT CAGGCATATA 
GCATGCCTCC TGGTGCCGCT GCTGTGCCGC CTCCCACCCT TGTTGACACT 
ACACCAAAAC CAACCGTGCC AATTCCTCAG ATGGCCGTGA AGCAGCCTGA 
ACTGCAGCAA CCTGGTTTGT ACCGAACTAC CGCAGCACCT ACCCCTGTAC 
CAGCGTCTAA TGCTCCTGCG TATGCTGGGA TGGGCTACCA CCATGTTATT 
CAAACACACC ATCATCCAGC GCCACAGCCT GCAGCGACTG TGGCAGGCAA 
TTTTGGATAT GACTATGGTG ATCCCACGCG AGCACAGGTC TTCTACTCGC 
AGGCAGCGGC ACCACCAACA TTGCCACCTC AGTATCAGCC CATGGGCTCG 
CCCGATGCTG GCCAGGCTGA CCTGAAACAG GCCCGGGCTT CATAGCTCAA 
GGATTTGTGA ACTCTGGTAT GTTGAGAATC CTAGAAGTGT AGTTATCCTG 
CCGTTAATTA TCACTATTGT TATTACATGT TACATGAGTC AGTTGGCAAC 
CAGTGGATGG ATGATGGCAT TAGGCAGCTG TGCATTTGGG ATCAAAATAA 
GATGAAAATG GGATGGTAGT TCTTGTGTTG GGTGAAACTC AAGAGGGTGT 
TTGTGATTGG TTCTGGAGAT GCCAATCGCC AATGCTGGAG CAAGTGGCGG 
GGAGTGGCTT CCAATTCCAA TTGCCGTCTT CTTATTTTTT AAAAAAATAA 
ATATATAGTG TCTAAAGAAC TCGGTACAAA TTCTGAATCA AGAACTCATC 
ATTTGTGTAG CCCTTTGTAT ATTTGAACCT GGAAGTTATT GAGGTTGAAA 
TGTC

Gene models with high sequence identity

AT2G01190.1 [+] show detail - Octicosapeptide/Phox/Bem1p family protein
E-value: 3e-65; Score: 247.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Octicosapeptide/Phox/Bem1p	0.0000000000000032
HMMSmart	Octicosapeptide/Phox/Bem1p	3.2e-31

See the detailed result >

AT2G01190.1

Model type: Protein coding
Short Description: Octicosapeptide/Phox/Bem1p family protein
Computational Description: Octicosapeptide/Phox/Bem1p family protein; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G18230.1); Has 5347 Blast hits to 4615 proteins in 344 species: Archae - 4; Bacteria - 100; Metazoa - 2308; Fungi - 1293; Plants - 931; Viruses - 29; Other Eukaryotes - 682 (source: NCBI BLink).
Link: InterPro Scan - TAIR