K33445

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33445

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33445

Determination of introduced cDNA(s)

J013088E05 - Rice Full-length cDNAs - Original: J013088E05

full reading [+] show sequence

GACTCCAACC CAATCCCAGC CATCAATACC TGCCTCCGCT TCGCCATCTC 
TCCCGAAGCC TCCTCTCTCT CTCTCTCTCC CCCCGATTCC ACCACACGCA 
ATCCAATTCC AACCTCGTGT GCTTCCACTT GTGCGTTTCG CCCGCTGCTG 
TGAACGTACT GCGAGATGGC AGCGGCGGCG GCGGCGGCGG AGGCGAAGCA 
CCGGAAGGAG GAGGAGGAGG ACGAGGAGGA GATGACGCTG GAGGACGGCG 
ACATCGAGGA GAGCCCGCGC CGCAGCTTCG ACGACGACTA CGAGGACGGC 
GGGAGCGGCG ACGACGACCG GGATGACGAC GGCGAAGGTT TGGGATCGCC 
TCGCTCGTTC CAGTCCCGCC AGTGGCCGCA GAGCTACCGA GAAACAACTG 
ACACCTATAC AATTGCTGCA TCTCCGAGCT TTGGTTACTT GGGTCCCTCT 
ACAAGCAAAT ACTCGATCCT TGATGGTGGT CGTAGTAGTC TGGGATCCGA 
CCTGAAGTTG CCCTTGTTGT CTGATAAGCT AGATGGGAAG CAAGACTCTG 
TCAAGAGCTT GAGAAAGACT CTTGGTTCAG CAATAGATAG GAAAAGCTCG 
TTACTTACGC AACATACTGG AGAAGTCTAC ATCGCTCAAG GATGCAGTGT 
GACACAGACG GTGTTCAATG GGGTTAATGT ACTTGCTGGT GTTGGACTTC 
TTTCCACTCC ATTTACAATT CATGAAGCTG GATGGGTAGG CCTTGCGGTC 
CTAGCTATGT TTGCTATTGT TTGCTGTTAT ACTGGAGTTC TGATGAAACA 
CTGTTTTGAG AGCAAAGATG GTATTTCTAC ATATCCAGAC ATTGGCGAGG 
CTGCTTTTGG AAGGATTGGT CGTCTGCTGA TCTCTATTAT ACTCTATACT 
GAGCTATATT CATATTGTGT GGAATTCATT ATTTTGGAAG GAGATAATAT 
GACATCAATT TTCTCTCATA TTGGTTTTGA TTGGCTTGGC GTCCATATTG 
ATGGGAAACA TTTCTTTGGA GTGTTGACTG CTCTAATAGT CTTGCCTACA 
GTATGGTTGA GAGATCTTCG GGTTCTCTCC TACCTTTCTG GTCTCAACAC 
TCTTAACCTC AAGTATTTTT CTCACTGCGA TCATTAATGA TATTAAGGCA 
GCAAATTGAA TTGACAAGGT TTATTGAATT TCTTGTGCAG CGGGTGGTGT 
TATTGCAACT CTTCTTGTTT TCCTCTCTGT CGTTTTAGTT GGCGCTACTG 
ATGGCGTAGG GTTTCATTTG ACTGGGAAAG CAGTAAACTT AGGTGGTATA 
CCGTTTGCTA TTGGCATTTA TGGTTTCTGC TACTCTGGGC ACTCAGTGTT 
TCCAAATATT TACCAATCAA TGTCAGACCG CACGAAATTC ACTAAGGCAC 
TGTTTATATG CTTTGCAATT TGCACAGCAA TATATGGCTC GTTTGCTATC 
ATTGGCTATC TCATGTTCGG AGATAAAACT CTCTCGCAAA TAACTCTGAA 
TCTTCCTAAA CATTCATTTG CCTCCAAGGT CGCACTGTGG ACCACGGTTA 
TCAACCCTTT CACCAAATAT GCCCTGTTGT TAAACCCATT GGCTCGGAGT 
TTAGAGGAGT TGCGCCCTGA AGGATTTTTG AACGAAACAA TCTGCTCTAT 
TATACTGAGG ACTGCCCTTG TTGCGTCAAC CGTGTGCATT GCGTTTCTTA 
TGCCATTTTT CGGTCTCGTG ATGGCTCTTA TTGGATCTCT GTTGAGTATA 
CTTGTGGCCG TCATAATGCC TGCACTGTGC TTCTTGAAGA TTAGGCAAAA 
TAAAGCAACG ACTGCCCAGG TCGTTGCAAG TATTGGTATA ATAATATTGG 
GCACCATAAG CGCTGCTCTT GGAACATATT CGTCGGTACT CAGAATTGTG 
GAGAACTACT AATTACGAAA CCTAGCTCGC GTGCAGTGCA GTTCCCAGCA 
GGTGAGGCCA CAGGCATGTC ATATCTATTA CTCACCCCGC TTACGGTTAC 
GGCGCTCAAA AATGGTCAAA TATCGTGTGT TTATCAGAAT TTTGCTAGAA 
TTACCGAGTT CACTGTAATT ATTCGACCCA ACCATGTAAT GCATGTACCT 
GCATAGCTGC TTGCTTCTCA GTTCCTTGAA GTGGAATATC TCC

Gene models with high sequence identity

AT2G41190.1 [+] show detail - Transmembrane amino acid transporter family protein
E-value: 3e-157; Score: 240.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Amino acid transporter, transmembrane	1.6e-24
HMMPfam	Amino acid transporter, transmembrane	2.5e-34
HMMPanther	AMINO ACID TRANSPORTER	2.6e-33
HMMPanther	AMINO ACID TRANSPORTER	5.2e-57
Coil	coiled-coil	0

See the detailed result >

AT2G41190.1

Model type: Protein coding
Short Description: Transmembrane amino acid transporter family protein
Computational Description: Transmembrane amino acid transporter family protein; FUNCTIONS IN: amino acid transmembrane transporter activity; INVOLVED IN: amino acid transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: Transmembrane amino acid transporter family protein (TAIR:AT2G39130.1); Has 4993 Blast hits to 4959 proteins in 300 species: Archae - 18; Bacteria - 67; Metazoa - 1755; Fungi - 792; Plants - 1459; Viruses - 9; Other Eukaryotes - 893 (source: NCBI BLink).
Link: InterPro Scan - TAIR