K33526

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33526

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33526

Determination of introduced cDNA(s)

J013088J03 - Rice Full-length cDNAs - Original: J013088J03

full reading [+] show sequence

GACCTAAAAC CCTCGAGCCA TGTCGCTCTC CACTGTCAAC CACGCCGCCG 
CCGCCGCCGC CGCCGCAGCG GGGCCGGGGA AATCCTTCTC CGCGGCTGCG 
CCTGCGGCGC CATCGGTGCG CCTGCCAAGG ACACGGGCTC CTGCTGCCGC 
CGCGGTGTCC GCGGCGGCTG TGGGGGCGGA CCGCGCGGCG GACAGGGTGT 
CGGCGCTGAG CCAGGTCTCC GGGGTGCTGG GGTCGCAGTG GGGCGACGAG 
GGGAAGGGGA AGCTCGTCGA CGTGCTCGCC CCTCGCTTCG ACATCGTCGC 
GCGTTGCCAG GGCGGAGCAA ATGCTGGACA CACCATTTAC AATTCTGAAG 
GAAAGAAATT TGCTCTTCAT CTTGTTCCAT CTGGTATTCT CCATGAAGGA 
ACGCTGTGTG TTGTTGGCAA TGGAGCGGTG ATCCATGTTC CAGGATTTTT 
TAATGAAATT GATGGTCTTG AATCCAATGG AGTCAATTGC AATGGAAGAA 
TATTGGTCTC TGACCGGGCA CATTTACTCT TTGATCTGCA TCAGGCTGTA 
GATGGACTTA GGGAAGCAGA GCTTGCTAAT TCCTTTATAG GGACGACTAA 
GAGAGGCATT GGACCATGTT ATTCCAGCAA AGTCACTCGA AACGGACTGC 
GAGTCTGTGA TCTAAGGCAC ATGGACACTT TTGGGGATAA GCTTGATGTC 
TTGTTTAAAG ATGCCACTTC AAGGTTTGAA GGCTTTGAGT ACAGCAAAAG 
CATGCTCAGG GAAGAGGTTG AGAGGTACAA AAGATTTGCA GAGCGCTTGG 
AGCCGTTCAT TGCTGATACT GTTCATCTGT TGAATGAATC TATCCAACAG 
AAGAAGAAAA TTCTGGTTGA AGGTGGTCAA GCAACAATGT TGGATATTGA 
TTTTGGAACT TACCCATTTG TGACTTCTTC TAGCCCTTCA GCTGGTGGGA 
TATGCACTGG CCTTGGGATT GCCCCAAGGT GTATTGGTGA CCTGATTGGA 
GTGGTAAAAG CTTATACAAC AAGGGTTGGT TCTGGGCCTT TTCCAACTGA 
ACTGTTTGGA GAGGAAGGTG ATCTCCTTAG GAAATCAGGA ATGGAATTTG 
GGACGACAAC AGGCCGCCCA AGGCGTTGTG GCTGGCTTGA CATTGTTGCA 
CTAAAGTACT GCTGCGAGAT AAATGGGTTT TCATCTCTTA ATCTGACCAA 
ACTTGATGTT CTGTCTGGAT TACCAGAAGT TAAGCTGGGG GTTTCTTATA 
ACCAACCTGA TGGGCAGAAG CTACAATCCT TCCCAGGGGA TCTTGATACT 
CTGGAGCAAG TACAGGTCAA ATATGAGGTG TTGCCTGGGT GGCAAAGTGA 
CATTTCGTCT GTCCGGAGTT ACAGTGAACT TCCCCTAGCT GCCCAACGCT 
ATGTCGAGAG GATAGAAGAG CTTGTTGGTG TTCCAGTCCA CTACATTGGT 
GTTGGACCTG GGAGGGATGC TCTAATATAC AAGTAAAAGC AACTCCATTT 
GGTCATCAAT TGAACCAAAA TATTTCAGCC CTAACTTGGC CTTGAGCGAC 
GCTCATCAGT ATTTACCGCT ATTTCGTTGG TACCTGTAAT ACATGGGAAA 
AGCTACTGAC TGGTAATGTG ATGCAATTGC CTGCAATAAT TCTAAGAATC 
TTCCAAGACG CC

Gene models with high sequence identity

AT3G57610.1 [+] show detail - adenylosuccinate synthase
E-value: 0; Score: 707.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	Adenylosuccinate synthetase	4.8e-235
HMMPfam	Adenylosuccinate synthetase	3.4e-164
PatternScan	Adenylosuccinate synthase, active site	0
PatternScan	Adenylosuccinate synthase, active site	0
Gene3D	no description	7.7e-57
Gene3D	no description	3.6e-62
HMMSmart	Adenylosuccinate synthetase	3.7e-255
superfamily	P-loop containing nucleoside triphosphate hyd	7.9e-170
HMMTigr	Adenylosuccinate synthetase	2.5e-157
HAMAP	Adenylosuccinate synthetase	32.067

See the detailed result >

AT3G57610.1

Model type: Protein coding
Short Description: adenylosuccinate synthase
Curator Summary: encoding adenylosuccinate synthetase (AdSS), the enzyme involved in the first step of the formation of the purine nucleotide AMP (conversion of IMP to adenylo-succinate)
Computational Description: adenylosuccinate synthase (ADSS); FUNCTIONS IN: adenylosuccinate synthase activity; INVOLVED IN: response to cadmium ion, purine ribonucleotide biosynthetic process, AMP biosynthetic process; LOCATED IN: apoplast, chloroplast stroma, chloroplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Adenylosuccinate synthase, active site (InterPro:IPR018220), Adenylosuccinate synthetase (InterPro:IPR001114); Has 10496 Blast hits to 10490 proteins in 2781 species: Archae - 222; Bacteria - 5613; Metazoa - 213; Fungi - 143; Plants - 71; Viruses - 18; Other Eukaryotes - 4216 (source: NCBI BLink).
Link: InterPro Scan - TAIR