K33739

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	decreased size (PATO:0000587) (Seed::Shape::small) decreased length (PATO:0000574) (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33739

Determination of introduced cDNA(s)

J023131I24 - Rice Full-length cDNAs - Original: J023131I24

full reading [+] show sequence

GGGTCTATCC GCTTGCCGGT GGACTGGAGT GGAGTGGCGG TGGCGGTGGC 
GCACACTCGC GGCGGCTCGT GCGCCCCTCC GCCTATCGCC GCCGGCGGCC 
GGCCACCCAC CCTCGAACGC CGCGGTGACG CCGGTGAGTT CTCGCTGCCC 
TATCCCCTAA ACCAGATTTT CCGAGCGGTG CCATGAGAGT CCGTCGAGTT 
CGCCTGAGCC ATTCAACTCC GCCGTGAGGG TGGGGGTCTC CGACGTGCCC 
GTCGGCGCGA TTCCGGGAAG CCGCCGCCGC CGTCGTCCTG CCACTGGGGC 
TGCCTCAATC AGGTGCTCTG TTTGCAGCGC CATCCACGAG ACGGGTTTAT 
CCCATTAGCC CACTACCTTT CCCTACATTT CTCTCTTCTT CGCCGCAGCT 
CGATTTGCAC AAGTTCGGTT TCATGATTTT TCTTTCAACA CCAAAGCGAA 
TAGCATTACA TCAGAATCTG TGCATGTTCA TGCGCAGTTT CATTCTTTGG 
ACGATGAATC ACCGTACATT GAAAGTATAT TTAAGTTTAT AACTGGGAAT 
TGTTGTTTGA AACTGAATAG GGATGTTGGC AGGCTGGGAA ACATTGGCTT 
CCTGTCCTGC GAGTGTCATT CATTCGTTGA TCAAAGTGTT ATTAGTGGTT 
ACCTTCATGC AGTGGCCAGC CACTGCTATC GTTGTTGTTC CGAATTCAAA 
CTGTTTTACC TTCGACAACA ATAGCCGCCT TGTGGACTTT GCAGATCTAA 
TCGGGAAGAA CTTTGAATAT AATGAAAAGG GCTCAGTACC TTCTGATTTG 
GTTGTCCAGT TCTGCAAAGA TGTGCAGAGA AGATCTCAAG CGGGATATAC 
GGACTTTGGA CGTTTTATCA GTTCTCGCTC TTTTATAACT GGTTCACAGC 
CTATTGACTT TATTCAGACA TTCCAATATG GAGATCTAGT GCACTGTGAA 
ACTACTTTTG AGAAGATGGG CCGCACATCA CAGGTTTGTG TCTAAATTCT 
GATCAGCTTC TTTCTTATTT TCACTACTTT TCGGATTTTT GTGGTCCCAA 
TTTAGGCTTG TGGATGCATT TCTGAACATA TTTCAGGTAA ACATCATATG 
CGGTCAATGC CCAAATAAAG AATGCAAAGG CAAACAAGGA TGCATCTGTA 
GTATATCTTA TGATGAACTG ATGTGCAGGG TGACTGTTGA ACTTGCTATC 
CCATGTCCTA AAAGTGGTCC AAGAGTATTT AAGGGTTTCA CTGTCGGATT 
CCATCCCCGG TCATCAGAGT TGGTTTATAA TGGATTGACT CAACTGGGAT 
TTGAGCAATC TCATCATGAG TTCAGCTTTC AGGGTGAGCA GAGTCATGTA 
TCCCTGTATC TTAGTGCAGT GTTTTCACTC TCAGGACTTG TTGGAAAACC 
TTCCTTGAAG GTTAATCCAG TTAAAGGGCT TGATGTGACA CTGACAGGAT 
CAGGGACCAA CGGTGCTATG CCTACTACCC TGTCCCCTAC AATTCTGAAT 
GTGATCTGGA GATGTGAAAT CGCGCGGAGC AGTCCTTATG AGGTCAACAT 
TTTGATTCCA GTAGAAGGCT ATGATCCAAT TGAATTTACG CTCACCAAAG 
AATGTGCTTC ATTGTGTTGT CAAGTCTACT TTGTTGTGGA GGTTTCATCT 
ACAAAACACG TGTCCAACAT CAGTCTGGTT TATATGCGCT GCCTGGGATG 
ACCATCTTGT CTGCCTTCCT AGATGCGGTT GGTGGACCAA GCTACATGAG 
AGCAGATGAT CATGGCGGAA ACCATGCAAG CCAAGCATCA TGGGAACGCA 
TGCCTGGTAC CTCACAAGCA GCAGAGCATG GCACCAAAGA TAGGAGATAC 
GGATCACTTT GAACTGAACG ATGCTTTAGT TTTTGAGGGT TGCTTTTTTG 
TAAGTTTGAA GTATTCTGTA ATCAGACAAA CTCTGCACTT CATCTGCAGT 
TGAGCTTCCG AAGCATTGCT TATCATCTTT TCAGCTTAGA TGGTGTTATG 
AATTGTGGTG GTGGATCATT CAGCATGCCA CCATCGTCAT CGCCATCCGA 
TCGACGTGCA TGCTCATTAG CAGATACTAG ACCTCTGTTC TTAGATAGTG 
CTCCCTCCAG TTTTTAATGC TCAACATTAT TGACTTTGGA CATATGTTTA 
ATGATTTATC TTATTAAAAA ACTTATGTAA TTATAATTTA TTTTGTTATT 
TGTTTTATTA TTAAAGAAAA GCATGACTTT

Gene models with high sequence identity

AT4G36440.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
E-value: 2e-99; Score: 74.70

InterPro Scan Digest

See the detailed result >

AT4G36440.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 41 Blast hits to 41 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR