K33841

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33841

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • decreased length (PATO:0000574)
    (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33841

Determination of introduced cDNA(s)

  • J033122A05 - Rice Full-length cDNAs - Original: J033122A05

    full reading [+] show sequence

    Nucleotide sequence: J033122A05 - full reading 
    GCCTTCCCCT CTCCCCTCCC AAAACCCTCG CCCCGACTTC GCCGGAGCGC 
    CGACGCCGCC CCCCCACCAT GCTGCTGCAC CGCCGTGGTC TCCTCCTCCG 
    CGGCGGCGGC GGCCTCCTCC GCCGCCTATC AGTGGCGGTC GAGGAATCCG 
    TCTCCCCGTC GCCGCCTCCT CCGCCGCCGC GGCAACCGCA GGAGGACTCC 
    GTGGATGACG AGGAAACGGC CTCGCCCTCG CCGGGGAAAC CGCAGGAGGG 
    CTCCGTGGCC GCCGAGGAGA GAGCCTCTCC CTCGCCTCAT CCGCCGCGGC 
    GCAAGAAGGA CTCCCTCTTC CGCCGGGTCG CGGCCGCCGC GGACCCGCGC 
    CTCCCGCTTT CCCCCGTCCT GGAGCAGTGG TGCCTCGCCG AGGAACGCCC 
    TATCGCGAAG CCCGAGATCC AGTCCATCAT CAAGTATCTC TGCCGCCGCC 
    GCCCTAGCTA GCACGTACTC CAGTAGACTG CGATGGGCGC GCCGCCGACC 
    AGGGAATCCG AAGCCCGCGA CGAGGAGGCG GAGGTGTCCC GATCGGGTGA 
    GCAAGGCGGC GGTGAGGCCT CTACGACGCA GCAGCAGCAG CAGCCGGTGC 
    CTCTGCGCCA CCAGCTGCTC GGCGCCTGCC GCGCCGACGA ACGCCTCAGG 
    CCCCTCCTCA CTCTCAACCT CTCATGCGGC GCCGCCGAGG ACCGCTTCAT 
    CTCCCACCTC TCGCAGCACT TCGAGGCGTC CGAGGTCGGC TTGCTCTACA 
    GGTGTCTCTG CGTTCCCCTC GTCGCTCTTC GCGTCGGCAA GGTCGACCGC 
    CATGGTCCTC TCCTCTGCCC AACGCCCATC AGAGGAAAGC TGAGCCTTGG 
    TCTTCTTCCT TCATCGAGCA TGTGCATTAT CTTTGCTGGT GATGATGGTC 
    ATTCGGAGCA ACTAGCTCTC CTGAACAATG ACCATGAAGT TTCAGAAGTT 
    TGTGTTGAAG AAATTTCAGC TGATAATACA GGACGATCTT TCCTCATCAG 
    GATTTCAGAA TCTAAAGTTT TTTACTATTG GTGTGCTGAG AAGTCAAAGA 
    AACACGGGAT GGACCTTCTT GCAAAGATGA AAAATCTACT GCAGGGAAGG 
    CCAACACTCT CTGATCTCAC AGGCATCTCA GATTCACGAC TGGATGCTTT 
    TGCCACTCAT CTACACGCTT ATCTTGTTGC ATCAAGTATT GGAGATGTTA 
    AATCGCTGGG ATCACTTAAT GACTTCCTGG GCGCTTCAAG CCCACAAGAT 
    CAATATTTAC AGCCCTCATC AGTTGTTTCC AAGTCTTCAC GCTTCTGCAC 
    CTCTGCAGCT AATGCAGCAA AAGCAAGTTC TGTCTACCAA ACTAGTCTGA 
    GTCCCAGATG TGGTGCTTTT AAAGATGGAG TGCCAAGGAT GTCGTGTGCA 
    AAGATTGCTG GAAGAGACAA GCTGAAGCGA CGTGGGGACT GGCTGAGCTC 
    ATCAACTGGT CCTGATGACG CAAATCTTTT GACACCGAAG ATTGTTAGCT 
    CTGATTCTGC CAGTGAGAAG TGTGGTGGGG ACTGTTCTGA AAACAGTGCT 
    AATTCACCTC CTCTAGACTT GCCTCTTTCA TTTCCCTTGT TGCCATCTCT 
    GTTTCCTCTT GCGACTCAAT ATCCACTTCC TAAGGATTCT ACAGAGCAAC 
    CATTTAAGCC TTACTATTGC TGGTGCCCAC CATGCCCATC TTCTCTGCAG 
    TACAGTGTAA CCCCTCTGCA TATGCCAGTT ACATCTGTAG AACCACTGCC 
    CTTGCCGCCT TTGAGTTCTC TGCTATCAAA TGATCAGCCG CCGACTTCAA 
    CAGTTTCTGC AAAGATGGAT ACAACTGATC TCCCGTCACT TAATCTTCCA 
    TCGATACTGC GTGATCCTTT ACTTCACCTG CCGCTTCCTA CTTCACCACT 
    TGTATCCTTG CATGGTTCAC AAGTTCCAAC ATTCACACCA TTGATGTCTG 
    ACCCCATTGT GCATGTCCCG GTCATTGATG TGTGTTCCTC TGGCCAGGCT 
    TACCTGGTGA GTTGCGGGCC TTCTATGTCT GCGACTGTTA CCCTGCTCCC 
    TAGCTTGAAG CCCCTGATTC CAGAAACAGA ATCTTTGGTT GAGAGAAGCG 
    CTAGGGAAAC ACTAATGAGG CTTATAGCCT CAACACCATC TGCAAGTAAT 
    CCCCAGCTGG TGAACATTCT CCCTGCAGTC CTTACTGACG TGCCTGAAAT 
    GAATGTGAGG AAACATCTTG GTGTCCATCC AGGCGACAGG CTAAGCTCAT 
    CTTGTAGCGT CGATGTGATT GGACCTGGGT TTGCCGTCAC AGAGGATGAT 
    GCATCTGTTG GAGATGGGGC TCACGCAACT TTTGCGGAAT ATGATGATAT 
    CGGCGATCAG CAGCATTTTC AGAGCATGTA GGTGGTAGGT TGTCGACAAG 
    GTACTCGTTG GTTGTCCAGA ATATTTTGAA AGGCAGTTGT ATCTATATGG 
    TAATAGCTTA GCGTTGGGTT TACTTTTGTG ACGCTCTGCG TACTGCCTAT 
    TTGCTGTGAT GATTTAGCTG CTCAGTCAAA AACCTCATTA GGTTGGTCAA 
    TGTAATTAGC TGTTTGTAGT GTATTCATTC ATAAAACTAA AAGCAAACTA 
    CCCAGTTAAT TTGCTCGTGC GTTTC

    Gene models with high sequence identity

    1. AT2G39950.2 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 4e-76; Score: 283.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G39950.2

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 941 Blast hits to 229 proteins in 79 species: Archae - 0; Bacteria - 8; Metazoa - 89; Fungi - 54; Plants - 41; Viruses - 0; Other Eukaryotes - 749 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR