K33913

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K33913

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K33913

Determination of introduced cDNA(s)

  • J033024D10 - Rice Full-length cDNAs - Original: J033024D10

    full reading [+] show sequence

    Nucleotide sequence: J033024D10 - full reading 
    GAGGGGGGAA AGAGCCGGAT CACCACGCCT CGAGCACGAG CTCGTCAACG 
    ACTCCGTCGT CTCGTCCACC TCCGAATTCC AAATTTTCCA TACCCTTCCT 
    CCCAGTCCTT ACACCTCTCG ATGCAAAAAC CCTAGCGGGG GAAGCACCAC 
    CTGCGCAGCC GCAGCGGCCA TGGCGGAGCC GGCCCTGCTG GACCCCACCG 
    CCGCCTTCGA CCTCCGCCTC TACCCGGCCC ACCTCTTCGA CCACGAACTC 
    CCTCTCGCCG GCGGCGGCGG CGGCGACGAC GACGACGACC TCCCGCTCGA 
    CGGGCTCGAG TTCGACCTGC CCGGCGATTT CTCCGTGGAG GACTTCCTCC 
    TCCGGTCTCC GGAGCGGGAC GACTCCGGCG AGGGCTCTGC TGCCGGATCC 
    GGGCCCACCG CCTCCCCGTC GTCGTCCCCG ACCACCTCGG CGTCCAACTC 
    CGCCGTCGCC AACGGCAGCG GCGGCGAGGT CAAGCACGAG GAGTCGGATG 
    AGGGGAGGAG CGGTGGGGGT GACCCCAAGT GGAGCCTGAA GCGGAAGCAG 
    GCGAGCCCCG GCCCGAGCTC GGACGCGGCC AAGTGCCGCC GATCCGGGGA 
    CGGCGACGTT TCTCCGTCGG CGTCGGCGTC GCGGACCGCT GTGGATTCCG 
    ACGAGGGGGG GACGGTGTGC GAGGAGGAGG AGGACGAGCG GCGGGCGGCG 
    CGGCTGATGC GGAACCGCGA GAGCGCGCAG CTGTCTCGGC AGAGGAAGAA 
    GCGGTACGTG GAGGAGCTGG AGGAGAAGGT GAAATCGATG CACTCGGTGA 
    TTAATGACCT CAATTCTAGG ATCTCCTTTG TCGTGGCCGA GAACGCAACA 
    CTGCGGCAGC AGCTTAGTGG CGGCAGTGTG AATTGCCCAC CACCTGGGGT 
    GTATCCGCCG GCGCCAATTC CCGGCATGCA TTTCCCATGG ATGCCTGGGT 
    ATGCAATGAG ACCCCCTGGT TCCCATGTAC CTCTTGTGCC AATCCCCCGG 
    TTGAAGCCGC AACAGCCAGT GCCTTCATCC AAAGTAGTGA AGAAACCAGA 
    GAGCAAGAAG ACTGTGGAGA ACAAGAGTAA GAGCAAGACC AAGACCAAGA 
    AGGTGGCTAG TGTTAGCCTT CTTGGTTTGC TGCTTATTAT GCTTGTCTTT 
    GGTGCTTTCA TTCCAGGGTT TAATCATAAC TTTGGAATGT GTGGGCAGAG 
    TGATAATGCT ATGTTTAGGA ATTTTGGTCA GTCTCATGCT AGGGTGTTGA 
    GTGTCAGTAG CCAGGATAAA AGTAGTTTGA ACAATAGCGA CATGATTGGT 
    GTTGATGTTG GAAAGATGAC GGGGAATACT GATGGGCCAG GGAAGAAACA 
    TCAGCCTGCA CACAACTCAA GTGAGATCCT CCCTGCTTTG TTGTATGTGC 
    CGAGGAATGG AAAGCATGTT AAGATCAACG GCAACCTGAT TATTCATTCT 
    GTGCTTGCAA GCGAGAAAGC AGTGGCACAT AAGGCCTCAA AAGATGATAG 
    TGATCAGTCA GCTAGAGATC ACAAAGAGAC TAGTGTTGCC ATAGCTCGTT 
    ATCTTTCGCT GCCTGGAAAG GATGTGAATC GACAGGAGAC ATCCTCGGCA 
    GATGGACCAT TGCCACAATG GTTTCGTGAA GGAATGGAAG GACCTATATT 
    AAATTCTGGA ATGTGCAGTG AGGTATTTCA GTTTGACATT TCGACGGCTT 
    CTAGCAATCC TGGTGGCATT ATACCTGCAT CTCCTGTTGT GAACTCGTCA 
    AGTGTCAATG CTACCGAGAA AATCCCAGCA CATTCTGCTG CTTATCATGG 
    CAAGCTGAAA AACAGAAGAG TCATGTACAA TGAAGCGATT CCACTCACCG 
    GGAAGACGGC GAACAACACA GAGCCTTTTA ACAGAACCTC TGAAAGCAGC 
    AGCAAGTTAC CTGATAGCAA GCCAGCATCA TCAGTTGTTG TCTCGGTGCT 
    AGCCGATCCA AGGGAGGCTG GTAATGGGGA TGGCGATCCG AGAGTATCTC 
    CGAAACCCCT GTCCAAGATA TTTGTTGTTG TTCTTGTTGA CGGTGTGAGA 
    TATGTCACTT ACTCCTGCAC GCTTCCTTTC AAGAGCTCCA GCCCACATCT 
    TGTGAACTAA GCGGCTGGGT TGTTCGCCAA AAACTGACAG ATGAATAGAT 
    TTATACAATG ATCTGATGCT GTTTCCTAAC CAAGGACTAA ACTTCCTATG 
    CACTCAGGCT GAGGTAATTC AAGTTTGTCG AAGGTTCGGA GTGATGAGTG 
    CGAGTTTAGT TCATGTATGC AGTTTTTGCA GTGCTGTGAT AATCGGGTTC 
    GTTTGCTGTA CCTCTAGCTG TAACGGTGAT GTAATCATGT AATACTGTTT 
    GATCGTTGAG ATATAAGTGC AACTAGTAAT ATGGGTAGTC GAGAACACGT 
    GCAGAATATA CATGCCTTTT TTTACCTTAG TTTCAATGAA TATCATAAAC 
    AAAGCTACAG T

    Gene models with high sequence identity

    1. AT2G40950.1 [+] show detail - Basic-leucine zipper (bZIP) transcription factor family protein
      E-value: 4e-71; Score: 266.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMSmart Basic-leucine zipper (bZIP) transcription factor 1.8e-15
    Coil coiled-coil 0
    HMMPfam bZIP transcription factor, bZIP-1 2.1e-10
    ProfileScan Basic-leucine zipper (bZIP) transcription factor 10.174
    HMMPanther CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 8.2e-07

    See the detailed result >

    AT2G40950.1

    Model type
    Protein coding
    Short Description
    Basic-leucine zipper (bZIP) transcription factor family protein
    Curator Summary
    bZIP17 appears to regulate transcription as part of a salt and osmotic stress response. zip17 mutants show enhanced inhibition of primary root elongation in response to NaCl. Several salt-responsive genes, such as ATHB-7 show a reduced transcriptional response to a salt treatment in zip17 mutant seedlings. myc:bZIP17 undergoes proteolytic processing in salt-treated wild type seedlings, but not in s1p-3 (subtilase) mutants and there is also evidence for S1P-mediated cleavage of bZIP17 in vitro. In addition, an mGFP:bZIP17 protein moves from the ER to the nucleus following salt treatment.
    Computational Description
    BZIP17; CONTAINS InterPro DOMAIN/s: Basic-leucine zipper (bZIP) transcription factor (InterPro:IPR004827), bZIP transcription factor, bZIP-1 (InterPro:IPR011616); BEST Arabidopsis thaliana protein match is: basic region/leucine zipper motif protein 49 (TAIR:AT3G56660.1); Has 2042 Blast hits to 1979 proteins in 244 species: Archae - 0; Bacteria - 308; Metazoa - 517; Fungi - 244; Plants - 733; Viruses - 84; Other Eukaryotes - 156 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR