K34047

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34047

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34047

Determination of introduced cDNA(s)

  • J023102F19 - Rice Full-length cDNAs - Original: J023102F19

    full reading [+] show sequence

    Nucleotide sequence: J023102F19 - full reading
    GGTTAAAGAT GATGAGGCTG GGAAGGGCGC CCTGCTGCTA CTGCTTCACC 
    GAGCCGCACC CCGCCGGCGG CGTCGCGGCC GCCGTCAGGC TGCGACTGCT
    GCCGCCTGCC CGCGCCGCGA ATACCTCCTC AGAGCCGGCG GCGCGGCTGA
    GGGCGGTTCT CGAGCAGGTG GACGAGGAGC TGCGGAAGGG GAACGACGAG
    GCCGCGCCGT CCCTCGTGCG CGGCTCGCAG GGGGCGGATG GCGGGCTCCG
    GTTCTTTGGC GCGGCGAGGC AGGTACCTCA AAGACTTTAT ACATTGGATG
    AGCTGAAGTT AAATGGGATC GATACTTCTG CTTTCCTATC TCCTGTTGAT
    CTGACTTTGG GATCAATTGA GAGAAATCTC CAAATTGCTG CAGTTCTAGG
    AGGGCTCTCT GTATCAGCTG CATTCGAGCT TTCTAAACTC CAAGTTCTGT
    TTCTGTTTTT GGGTCTACTA TCTCTGTGGT CGGTGGATTT GGTATATTTC
    GGTGGTGGAG TGAGAAACTT GATTCTTGAT ACAATTGGTC ACAATCTTAG
    CCAGAAGTAT CGTAATAGAG TTATTCAGCA CGAAGCTGGC CACTTCTTGA
    TAGCGTATTT GCTTGGGGTC CTTCCCAAAG GATACACTAT CACAAGTTTA
    GATACATTCA TAAAAAAGGG CTCACTGAAT GTGCAAGCTG GGACAGCTTT
    TGTTGACTTT GAGTTCCTTC AAGAGGTCAA TTCAGGCAAA CTATCTGCCA
    CGATGTTGAA CAAGTTCTCA TGCATTGCCT TGGCTGGAGT AGCAACAGAG
    TATCTTTTGT ATGGATATGC TGAAGGAGGA CTAGCTGACA TTGGGCAACT
    AGATGGATTG CTCAAAGGTC TAGGTTTCAC CCAGAAGAAA GCTGATTCAC
    AGGTGAGATG GGCTGTGCTG AATACTGTAC CTGCACTGCG TCGCCATAAA
    AAGGCCAGAT CACAGCTCGC GGAGGCAATG TCCTCTGGGA AGTCAGTTGG
    ATCTTGCATC GGGGTCATAG AAGAGAATAT AAACTCTGAG GATATTTAGT
    TAGTGACTAT AAAGATGATG GAAAATATAG ATCACATATG TACAAACTTT
    CACAATGGAC TGTACCTTTT AACTTGGGCT TTGTATTTAG TCTGTTAGCA
    GGAAATACAT GTCAAAATCA TGGTTTTTAT TCAGTTTCAT ATATTAAACG
    TTT

    Gene models with high sequence identity

    1. AT5G27290.1 [+] show detail - unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13...
      E-value: 4e-107; Score: 385.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G27290.1

    Model type
    Protein coding
    Computational Description
    unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54680.3); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR