K34133

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34133

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34133

Determination of introduced cDNA(s)

  • J013123P12 - Rice Full-length cDNAs - Original: J013123P12

    full reading [+] show sequence

    Nucleotide sequence: J013123P12 - full reading 
    GACACACACA CGCACAACGC CCAAACTGGT GCGCACCTAC ACCCGCGCAC 
    ACAACACAGA CACGGACGTA CACTTTGCAC CTCTCTCACC GCACGTAGTC 
    GCCATGGTCG CTGTCACCGT GATGAGGAAG TCCCGGAACT TCGTCGGGCC 
    GTCTCCTCCG ACGCCGCCGG CCGAGATCAC GACGACGCTC GAGCTGTCGT 
    CCATCGACCG CGTGCCCGGG CTGCGCCACA ACGTGCGGTC CCTGCACGTG 
    TTCCGCCGCC ACAAGAACAG CGGGCCCGTC GTCGACGGTG ATAGCAGGAG 
    GCCGGCCGCC GTGATCCGCG CGGCGCTCGC CCGGGCGCTG GCGGACTACC 
    CGGCGTTCGC CGGCCGATTC GTCGGCTCCC TGCTGGCCGG CGACGCCTGC 
    GTCGCGTGCA CCGGCGAGGG CGCGTGGTTC GTGGAGGCAG CCGCGGACTG 
    CAGCCTCGAC GACGTGAACG GCCTCGAGTA CCCGCTCATG ATCTCCGAGG 
    AGGAGCTGCT GCCTGCCCCC GAGGACGGCG TCGACCCTAC CAGTATTCCA 
    GTCATGATGC AGGTGACTGA ATTCACTTGT GGAGGATTTA TCTTGGGCCT 
    TGTGGCAGTC CACACCCTTG CTGATGGACT TGGAGCAGCA CAATTCATCA 
    CTGCAGTAGC TGAATTGGCC CGTGGCATGG ACAAGCTCAG GGTGGCTCCC 
    GTGTGGGATC GCTCGCTGAT ACCGAACCCA CCTAAGCTCC CTCCTGGGCC 
    ACCACCATCG TTCCAGTCCT TTGGTTTTCA GCATTTCTCC ACAGATGTCA 
    CCTCTGACCG TATAGCTCAC GTGAAGGCTG AGTACTTCCA GACCTTTGGC 
    CAGTATTGTT CCACCTTTGA TGTTGCTACT GCTAAGGTTT GGCAGGCCAG 
    GACACGGGCC GTCGGGTACA AACCGGAGAT CCAGGTCCAT GTGTGTTTCT 
    TTGCAAACAC GCGTCACCTG CTCACGCAGG TTCTCCCAAA AGATGGGGGC 
    TACTATGGCA ACTGCTTTTA TCCAGTGACT GTGACAGCAA TAGCTGAGGA 
    TGTTGCCACC AAAGAGTTGC TTGATGTGAT CAAGATAATT CGGGATGGAA 
    AGGCGAGGCT CCCCATGGAG TTTGCAAAGT GGGCTTCAGG GGATGTGAAA 
    GTTGATCCCT ACGCATTGAC ATTTGAACAC AATGTGCTTT TTGTGTCTGA 
    TTGGACGAGG TTAGGATTCT TCGAGGTAGA CTATGGGTGG GGTACACCTA 
    ATCACATCAT ACCATTCACT TATGCAGACT ACATGGCAGT CGCAGTGCTT 
    GGTGCTCCAC CAATGCCAAA GAAAGGGACC CGGATTATGA CACAGTGTGT 
    GGAGAACAAG TGTATCAAGG AGTTCCAAGA TGAGATGAAG GCCTTCATAT 
    AATATATATT ATATGTGTAG TAGGTTGGAA TAAATTTGCT ATTTATGAGT 
    AGTATTTGCA GGGTCCAATC AATACCATGC TTGTTGTATT GTGTTAAATA 
    CATGATATAT GACCTGGACA ATTATATATA CGTGTGTTAA TTAAGTTATA 
    AGG

    Gene models with high sequence identity

    1. AT3G62160.1 [+] show detail - HXXXD-type acyl-transferase family protein
      E-value: 4e-73; Score: 272.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 8e-45
    Gene3D no description 3.3e-32
    HMMPfam Transferase 2.2e-62

    See the detailed result >

    AT3G62160.1

    Model type
    Protein coding
    Short Description
    HXXXD-type acyl-transferase family protein
    Computational Description
    HXXXD-type acyl-transferase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transferase (InterPro:IPR003480); BEST Arabidopsis thaliana protein match is: HXXXD-type acyl-transferase family protein (TAIR:AT1G28680.1); Has 2278 Blast hits to 2266 proteins in 115 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 12; Plants - 2263; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR