K34238

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34238

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34238

Determination of introduced cDNA(s)

  • J023014L08 - Rice Full-length cDNAs - Original: J023014L08

    full reading [+] show sequence

    Nucleotide sequence: J023014L08 - full reading 
    GTTTGTCTCC TCCGCTCCTT GCCTCCTTGC GCCGCCGCCA AGACGAGTCG 
    CGGCTGAACA GGGGAGGGCC GGGCGGCGAT CTCCATCGCA GCGGAGGGGA 
    GGGGATCCTG GAGTGAAATA AAAGGATGAG GCTGGTTGGA TTGACTGGTG 
    GGATTGCGTC TGGAAAGAGC ACCATCTCCA ACCTGTTCAA GGCTAGCGGC 
    ATTCCTGTTG TTGATGCCGA CATTGTTGCT CGGAATGTGG TACAGAAAGG 
    CACTGGAGGT TGGAAGAAGA TTGTAGAAGC TTTTGGAAAT GATGTTCTGT 
    TAGAAAATGG AGAAATTGAC CGAGCTCGCT TAGGACAGAT TGTCTTTTCT 
    GACCCGGAAA AACGCCAAGT TCTAAACCGT CTCCTGGCTC CACATATTTC 
    ATCTGGGATA TTTTGGGAGA TACTAAAACT GTGGATAAAA GGATGCAAGG 
    TTATCGTCCT CGACATTCCT CTGTTGTTTG AGACAAAGAT GGACCAATGG 
    ACGCACCCTG TTATTGTTGT GTGGGTGAAT GAAGCAACCC AGATTGAGAG 
    GCTAATGTCA AGAGATGGGT GCTCTGAAGA ACAAGCTCGG AATAGGATCA 
    ATGCGCAGCT TGCGTTGGAC TGGAAGAAGT CACAAGCAGA CATTGTGATC 
    GACAATTCTG GCACGCTGGA TGAAACCAAA GAAAAGTTTC AGGAAGTGTT 
    GAGGAACGTC TCTGAACCCC TGACATGGAA GGAGCGGTTG AGGTCTCGGG 
    ATGGTCTTTT CTCCGTTGTG GTATGTACAG CAGTGGGGGT TCTGCTTGCC 
    CAGAAGAATC TGCTATGATC TTTATCTTTA TGTGCTTAGG TCAGGGAGGA 
    TTGAAATGTC AATCCAACCT TGCTAGGTAT AGTCAAGATT ACAGTCCTTC 
    ATATGTTTTG TTTTTTCTGT TAGTTAAAGA TCTGCACTGG TGTCTTGCAA 
    CAGTTGATGA AACTTGGAAT GTACACTGCA TAATTGAGGT TACATTCTAA 
    TCCTTTCTGT CGCTAGGGAT TTCTTGAGGA GTGGATGGAT ATAGTTGTGG 
    GCTGTGACTC TTGGATGCAG GCCTCACTTG AGC

    Gene models with high sequence identity

    1. AT2G27490.2 [+] show detail - dephospho-CoA kinase family
      E-value: 2e-84; Score: 309.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMTigr Dephospho-CoA kinase 6.9e-53
    Gene3D no description 6.1e-65
    ProfileScan Dephospho-CoA kinase 56.735
    HAMAP Dephospho-CoA kinase 26.782
    HMMPfam Dephospho-CoA kinase 9.7e-64
    HMMPanther DEPHOSPHO-COA RELATED KINASES 3.3e-41
    superfamily P-loop containing nucleoside triphosphate hyd 4e-48

    See the detailed result >

    AT2G27490.2

    Model type
    Protein coding
    Short Description
    dephospho-CoA kinase family
    Curator Summary
    AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA.
    Computational Description
    ATCOAE; FUNCTIONS IN: ATP binding, dephospho-CoA kinase activity; INVOLVED IN: coenzyme A biosynthetic process; LOCATED IN: peroxisome, chloroplast, vacuole; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dephospho-CoA kinase (InterPro:IPR001977); Has 7074 Blast hits to 7073 proteins in 2608 species: Archae - 1; Bacteria - 4684; Metazoa - 251; Fungi - 135; Plants - 58; Viruses - 0; Other Eukaryotes - 1945 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR