K34250

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34250

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34250

Determination of introduced cDNA(s)

  • J013155G19 - Rice Full-length cDNAs - Original: J013155G19

    full reading [+] show sequence

    Nucleotide sequence: J013155G19 - full reading 
    GTTACGATGG CTCATTGTCA GATATCTGGT CTTGTGGAGT AATTCTCTAT 
    GTAATGCTCG TCGGATACCT TCCCTTTGAT GACCGAAATC TTGTTGTCCT 
    GTACCAGAAG ATTTTCAAGG GGGACACTCA AATCCCAAAG TGGCTTTCAC 
    CTAGTGCACG GGATCTTCTT CGAAGGATTC TTGAACCGAA CCCGATGAAG 
    AGGATCAACA TAGCAGGGAT CAAAGAGCAT GAGTGGTTTC AGAAGGATTA 
    CACTCCTGTT GTTCCATATG ACGACGATGA TGACAATTAT CTTGACTCAG 
    TTCTTCCAAT CAAAGAGCAA ATTGATGAAG CAAAGCAGGA AAAGCCTACT 
    CATATCAATG CTTTTCAGTT GATTGGAATG GCTTCTGCCC TTGATCTTTC 
    AGGTTTCTTT GAGGAAGAGG ATGCGTCTCA AAGAAAGATA AGGTTCACAT 
    CAACACATTC ACCAAAAGAT TTATTCGACA AGATTGAGAA TGTTGTGACG 
    GAGATGGGAT TCCAAGTCCA GAGGGGTAAT AGCAAGCTAA AGGTCATGAA 
    AAATGGCAGG GGTTCAAAGA ACCTCAGGAA TCCATCATCA TTCTTGGTCT 
    GTACTGAGGT AGTCGAGCTC GGGCCATCCT TATATGTTGT CGAATTGAAG 
    AAATCCCATG GAGATCCTAT ATTGTATAGA CAGCTATGTG AGAGGCTATC 
    AGATGAGCTA GGAGTGTGCA AGACAGAGCA GATTCAGAGG ACGGAGTCGC 
    TGGAGGATGA TCTAGAGAGC TTCGACAGCG GATCTTCTTT GCCTGGTTTT 
    TGAAGAATTG CCGCCCTGGA TCATTTTGGT TAGAGTTAGA GGAACATGCT 
    CTGTTCTTCA TACAAGCGTA GGTTAGGATG TTGTATAGTG TACAAAGTGA 
    GTGGTGCAAG TTAGCCACCG ATGTTTAATA TAAGGATTGC TCTCTTCTTG 
    CC

    Gene models with high sequence identity

    1. AT3G17510.2 [+] show detail - CBL-interacting protein kinase 1
      E-value: 1e-64; Score: 243.00

     

    InterPro Scan Digest

    Program Description E-value
    ProfileScan Protein kinase, catalytic domain 14.478
    ProfileScan NAF/FISL domain 12.455
    HMMPanther CBL-interacting protein kinase 4.8e-86
    HMMPanther Calcium/calmodulin-dependent protein kinase-like 4.8e-86
    HMMPfam NAF domain 1.6e-21
    HMMPfam Serine/threonine-protein kinase-like domain 0.00000000000022
    Gene3D no description 1.8e-20
    superfamily Protein kinase-like domain 2.7e-22

    See the detailed result >

    AT3G17510.2

    Model type
    Protein coding
    Short Description
    CBL-interacting protein kinase 1
    Curator Summary
    Encodes a CBL-interacting protein kinase. Specifically interacts with ECT1 and ECT2.
    Computational Description
    CBL-interacting protein kinase 1 (CIPK1); CONTAINS InterPro DOMAIN/s: NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: CBL-interacting protein kinase 17 (TAIR:AT1G48260.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR