K34406

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34406

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased width (PATO:0000599)
    (Seed::Shape::narrow)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34406

Determination of introduced cDNA(s)

  • J033079P11 - Rice Full-length cDNAs - Original: J033079P11

    full reading [+] show sequence

    Nucleotide sequence: J033079P11 - full reading 
    GCTCGACTCC AGTTGGGGAG GCATTCTTTT CTTTTTCTTT TTTTTTCACT 
    CTCGCGTCCA ATCCCTGAAT CCGCTGGCCC GCGTCGAAAC CTAGGGGCGC 
    GGTGGCGGTA TAGCCGACGT TCAGATCCAA ATGGGGGCGG CGCCGTCGAC 
    GCCGAGGCTG GGCGCGGTGG CGGGGGCCGC GGCGTCGCCT GGGGCGGCGG 
    AGCAGATGTT CGCGGCGCTG GTCGGCGGGA AGGCGTACCC GATCTCCTCC 
    GAGTTCTGGA GGCAGCTGCT CGAGCTGCCC CTCACGCAGC AGTGGCCGCG 
    GGACCGCGTC CTGCAGGCGT GTCACGCGTT CGCCCAGAAC AACTACCACA 
    CAAAGCATCT CGCAAAGATT TTGATCCATT TGGTTTGGTG CTTGCAAGAG 
    TGCATGGCAG AGTCTTCTCA CGCGGCGTAT AGGAAGGCTA TCAATGCTGC 
    ATATATATCA TCCATATTTC TCAAATTCAT TATTGAAAAT GCAAAGACTG 
    ATAATTGGCA AGAGCTAAGT CTTGAAATTG ACAAGGATGA GAAGGGGCTG 
    GGAAATTTTC CTTCTGAACA AAGCGTGGAA TATTTTCTGA TGAGAGGTGT 
    TCTGAACTAC ATTGGTAGTG TAGATGTAAG TCTGGAGTCA TGCTACCTGC 
    ACCATGAACT TCTAAACTTG ATGCTAGTAC TTATGTCAAC TCAATTGTGT 
    TCTGGACCAT CTCCTGAACC AAAAGATGTG CATCCTTTCA TTGATGCGGC 
    TATGCTTCAG GACAGTTCCA TAGTGTCCTC GGTAGTTCAA AAGTTGCTGC 
    TAAATTTTGT AAAACGACCA CGGATTCCTT TAAACAGTTC ACACCCTGCT 
    TTCTCTGATG ATGGTGGACC TGGTGTTTTG CAGCGAGTTG GTTCAGTTGC 
    TGCAAACTTT GTACTACTGC CATATTATAC TTTCAACTAC CTTGTGAGCT 
    CAAACGCTGA AGGCGCATCA AGTCAATTGG CAGACAACAG TTTACTTGTT 
    CTGCTTATTC TGATCCACTA CCGGAAGTGC ATTACGATGA GCGAATCCTT 
    TCCAAGCAGT AATGTCTACA CAAGCGATTT AAATACCAAT GTCAAGGATG 
    CACCGGCTTT TCATGATAAT CCATATTACA AGGCCTTAAG CAATGCCAAA 
    GACAGTCAAT ATGATCGTGC TGATGTTGAA GGAAATGCTC AAAATGGGCT 
    AGTTGTCAGG TTGTCTTTTG CATCGCTATT TGACGCTCTT GGCACATGCT 
    TAAAAGATGA GAGCTCGGTT CTACTGCTCT ATTCTTTGGT CCATGGGAAC 
    TGTGACTTTC AGGAATATGT TCTGGTTCGA ACAGACCTGG ATACTTTGCT 
    GATGCCTATC TTGGAAATGC TCTACAATGC ATCAAGAAAG ACCTCCAATC 
    AGATATACAT GCTATTGATA GTTCTTCTTA TACTCAGTCA AGATTCAACC 
    TTCAATGCTA GTGTGCACAA ATTGGTGCTT CCGAGCGTCC CTTGGTACCA 
    TGAGCGCCTT ATGCATCAAA CTTCTTTGGG ATCTTTGATG GTTGTTATAC 
    TAATCCGAAC CATCAAATAC AACCTCTCCA AACTGCGAGA TGTCTACCTT 
    CATACAAACT GCCTTGCAAT TCTAGCAAAT ATGGCCCCTC ATGTGCATAG 
    GCTGAGTGCA TATGCATCTC AAAGGCTGGT TAGCCTCTTT GACATGCTCT 
    CTCGCAAGTA TACCAAATTA GCCGAGTTAA AAAATGACAA AGCTATCAAA 
    GTTATATCTG ATCAGATTGA AGCAGACAAC ATCTCAGATG ATACGTCCAC 
    AGAACTTCAC ATCTATACCG ACTTCTTAAG AATTGTTCTA GAAATCATCA 
    ATGCAATTCT TACATATGCA TTGCCTAGAA ATCCTGAGGT CGTGTATGCT 
    ATCTTGCATC GACAAGAGGT ATTTCAGCCA TTCAAAAACC ATCCCCGCTT 
    CAATGAATTG CTTGAGAATA TTTACACAGT GTTGGATTTC TTCAATAGTC 
    GAATGGACAT GCAGCAGTTA GATGGAGAAT GGTCTGTAGA TAAGGTTCTT 
    GAGGTTATTA ACAAAAACTG CCGTTCATGG CGTGGAGAAG GAATGAAGAT 
    GTTTACCCAG TTACGGTTTA CATATGAGCA AGAAAGTCAT CCTGAGGAGT 
    TTTTTATCCC ATATGCATGG CGCGTTGTCC TATCACGAGG ATTCTCTTTC 
    AATCCTGGTG CAATAAATCT GTTCCCTGTG GAGATTCATG TTGATGATGA 
    ACCATCCGGT GAACAAAAGG TCTAAGAATA ATCTTGAATG TTGAGTTCTG 
    ACTACAGCAG GATGACATGT TCCATCCACC GAGGCAAATA GATATTGTAC 
    ATAGGAGGCA TATACCAGAC GATCGACATG TATTCTTATT CATTTGTGTA 
    TATTTCCGTT TCCTCATAAT GTAATACCAG AGGTCAGCGG GAGGAGAGAG 
    CGGTATTTAG GTGGCAGAGA ACTATGTAGG GTACAACGAA CAATTCTTTC 
    ATAAGTTAAT CTTTGTATTT TTTTTTCATC TCTTATCACC TCTGACGCGG 
    GAAGGCCACT CTGGTGTTTT AACATGTCTA CCGTACCGTC GGTCGGTTTT 
    CCTGCG

    Gene models with high sequence identity

    1. AT1G04200.1 [+] show detail - FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED...
      E-value: 0; Score: 805.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther SUBFAMILY NOT NAMED 2.1e-303
    HMMPanther FAMILY NOT NAMED 2.1e-303
    HMMPfam Dymeclin 1.1e-226

    See the detailed result >

    AT1G04200.1

    Model type
    Protein coding
    Computational Description
    FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dymeclin (InterPro:IPR019142); Has 395 Blast hits to 389 proteins in 117 species: Archae - 0; Bacteria - 0; Metazoa - 262; Fungi - 21; Plants - 68; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR