K34442

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34442

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • decreased length (PATO:0000574)
    (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34442

Determination of introduced cDNA(s)

  • J023087N09 - Rice Full-length cDNAs - Original: J023087N09

    full reading [+] show sequence

    Nucleotide sequence: J023087N09 - full reading
    GGTCATTCGC TGATCGCATC TCCGTCGTCA CGAGCAGCCG CCGCCTCCGC 
    CTCTCCCACC CGCGAGATTC CGCCGTCACC GACCGCAAGC TGCACTTCCC
    TCTTCTTCTA ACTGATGTCA GGCGACGGCC CTCGATGGGT ATGTTTTTGG
    CATCAAACCA AAACGGCCCT ATACGAGATG AAGGAAAATG CCTGACCTGC
    CGACCATGGA CGACGACGAC GACAAGATGG GCACTCACGC ACAGGTGCAG
    CAGCTGCCCG ACGAGCTGCT CTTGGAGATC CTGCTCCGCC TGCCGCCCCG
    CGCCATCGCG CGCTGCCTCG CCGTCTGCTC GGCCTGGAGC TCCGCCGTCT
    CCGCCGCGGC CTTCCGCCGC GCCCACGCCG ACCGCCCGGC CGCCGTCTGC
    AAGGCCACCG CCACGGCGAT CGACTGCTGC GACCGCGACG CCGTCGTCCT
    CGACGCGTTC CTCGGCCGCT GGCACCGCGG CAACGTCCAC ACCACGCCGC
    GGTCTCCGCG CGGCCTCGTG TTCCCGGCGG CCATGGCCCC CGAGCCCGAC
    ACCCCGTGGG TACTCGATAC GCTGGTCGTC GGCTCCTGGG ACGGCGTGCT
    CTGCGTCGAG CGAGGTGCTC CTCTGCTCCG GGGAAGCCGC TGGGACGCCG
    GCGTCCATCA CTGGCCCAAA TCCGGCCGGC TCCGGGAGTA CGTGCTCTGG
    AACCCACTCG CCATGACCCG CGCCACCGTC TCTCCGCCGC CCGGCCGCGG
    CGCTGTCATC GGAGGCTACG CCCACCCGGC CACCATGCGC TTCCACCTAC
    TTCACGCCGC CGGCGAGGCC GCACGCCGTC CAGGTAGCCT CGGCCTGTTC
    GTCCCGACCG TCTTCCGTGT CCAGCGAGTC GGAGACGGCG CCTGGCGCGA
    GGTTCCCCTC CCTCTCCTGG AACAACAAGA CGATCACGCG CACGCGCAGC
    TGCAGATGCA CGGCGCTCGC TCCGTCGCCC TGCACGGCAA CCTGCACTGG
    CTGGTGCAGC GGGGTGGATC GGCCGGACCC GGACGGCTGC AGGTGCTCGT
    GTTCGAGCCG GCGCGCGAGA GGTTCCGGCT GATGGAGGCG CCGCCACGGC
    GCCATGGCGA GGAGGACGAC CTGGCAAGAT CGCGGATCGT CGTCCTGTCC
    AACGGCAAGC TCTGCGCCGT GGCCGTGCGC CCGGCCACCA GCACGATGGA
    GATGTGGGTG CTCGACTCCT CCTCCTCCGA CGCGCCGCGG AGATGGCGGC
    TCGACGCGTA CAGCCTCCGG CGAAGGAAGT GGACGAGGGT GTGCGCCGCG
    CGCCCCAGGA GTGGTTCCGT GGGCGTGGCG CTGCTGCCGC ACCGGGAGAG
    CGTTGCTGAT GATCAGCCCA GCTTCGGCGA GGCGTCCCGG CTGCTCGACC
    ACACCATCGA CATCGACGTC GATGACCAGT ACTTGTCTAT GAACCCAATT
    ACTTTGTTTT GTTACTGAAC ACCGATTGAG TTATTTATAT CAGCTTAGTT
    TTATTAATTT TAGGAAATGA ATAAAATAAG AACTATCTTA TAAAGAATTA
    ATTTGTTGGT GGC

    Gene models with high sequence identity

    Not founds.

     

    InterPro Scan Digest

    Program Description E-value
    ProfileScan F-box domain, cyclin-like 9.55
    superfamily F-box domain, Skp2-like 0.0000000000031
    HMMPfam F-box associated domain, type 1 0.0000046
    HMMPfam F-box domain, cyclin-like 0.00016
    HMMSmart F-box domain, cyclin-like 0.0000089

    See the detailed result >