K34450

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34450

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34450

Determination of introduced cDNA(s)

  • J013125I24 - Rice Full-length cDNAs - Original: J013125I24

    full reading [+] show sequence

    Nucleotide sequence: J013125I24 - full reading 
    GAGCAAAGTT TCCTTTCCCC AATCAATCGC CAATCCCCCT CCTCAATCTC 
    TCCTCCTATT TTCTCCTCTC GCCGCCGTTT CGCCTGGCAA ATCTGCATGC 
    CAAGCCGCGA TGCCATGCCA TGGCAAGGCC AGGATGGGTC TGAATTTGTC 
    GTGTCATATC CACTCGAGTC GCGAGTTGGC CGGACGCCGA GGAGAGTAGC 
    CGCGGATCTG ACTGCATGAC GCGGTCAGCG GGCCTGGATT CCTACGAAAG 
    GAGCCGCCTT TGATCTATAA TCGGAGGAAT ATGAAGGATT AAATACCTTA 
    ACAACTGCCA AGGCACCATT GTTCTCTACG GTGCAGAAGC GAGCCTAAAG 
    TGCCGCTCAT TTTGGTTTAT AATCGGATTA GTCTTTGTTC AGCTGATCTG 
    CGCAATCCAA TACCGAGTCG TGAAGGAACA TGCTGATGAT GCATTCTATG 
    AATTGCAGAA TCCCCAACAG CAAATTCAGG CCTATGCCTT TGATGGTAAA 
    CTATTAACAT TGAGCAATTA AATAGTTGCC CATATCAAAT TATTGACTCA 
    AAGCTTAATC ACTTTCCCCT CGAACTTAGT GGTCCTGGCC CTAGTTCCAA 
    GAATGAATCT TGATGACCTT TTTGAGTAAA AGAATGATGT GGTGAAGACT 
    GTACTTGAGG AGCTTGAAAA GGTAACTCAA GTGCCTGTTT TTACTGAGTC 
    CAGCTCTCTA GGATTAAGTT GATCGGCTGA TTATGCAAAC TCCAGTAAGA 
    CAAATCATTG TTTTTCCTTG TTTGCATGTA TTGCATTCTG CCATGGTCCC 
    AGGGACGAAG CTAGCATCAA AACAAGGGGG TGCACTACCA TTGAAAATCT 
    AAAAAATTTC AGTACAACAC TGTACATTCT AGTGTTTTTA AGTGAGAAAT 
    TAGAAATTTG GGGGGTTCAT GTGCACCCCC CAAGCATAGT GTAGCTTCGG 
    CACTGCATGG TCCATCATTC CATGTACCGT TGTCATCCTG TCAGGATTCT 
    AAATCTAGTC AAACACATTT TTGTGTTAGC TGAAGTATTA TTCTCTCTTT 
    TTTTTTCTCT TGTGCACCTA TTTGCATGTT GAAAGAGTTG GAATCTTTGT 
    TTGGTATACA TTTTAAGCAT GTTATTTCGT TACCCACAAT TCATACTATT 
    CTTCCAAGAT TGGTTTACAT GCTTATGTGG AATTCTAGTC CCAGAATACT 
    GTTTGATGGA ACTTGGCTGT ATCAAAAGGA AATCTGGCAT TGGGCTGTCT 
    GCATCGCTTA TCTTTCGTTG GAAACTTACG TGCTTACCAA ATTTTAAACT 
    CTGTGATTGC TTCTTCCTCA AGTGTTGGAT ATTCCATTCA TGATAACCAA 
    TGCTCTCTCT GTTCGTTCTA AGTTCCATTC CTAATGTGTA GTTTTGTCCT 
    CAAACATTTT TTTATCTTAG TACTTGTTAG TGATAAGCAG TTTATTATTT 
    GTACCGTTAT ATATTATATG CCATCTTTGT AAAAAAAGAC TGTTCTGTAG 
    TCTATACATC GAACATATTC TTATGGTTGA TATCATCCCT GATACTTCTG 
    TACGCAGAGC AATGAATGAC ATAAATGCAG GTATTATTCC CTTTCAAGTA 
    TATATGGTAC TTCTTTCAGT CTGTGCAACC TGCATGATGT TTATTAGTCT 
    ATTTAATGTT GTAATGTTTT CTGAAGTAAT AATCTGTCAG ACTTCTTAAT 
    TGATGATTAT AAGCTCTCTC TCTCTCTCTC TTCTACTTAT GCTTCGTTTG 
    CTTTGTTTTC CGATGCTTGT AGTGTTTGGA GTAGCTGCTG TGAAGCTAGC 
    CCACAACGTG GGTAAGGTTG TCTGTTTGGG GGGTGGGTGT GTTTTGTGTG 
    TGTGTGTGTG TGTGTTTTGG TGTTTGGGGG GGGGGGGGGG TTCTGGCTCT 
    GCATAGCACA TTTTAGAACC ATTGTCAAGT ATGTAGCCTA CTGCAACTTG 
    CATAGGACCA AAGGGTGATG TTTCTGTGTA GAGAAGTTAG ATGGCGATGA 
    GTCAATGACT TGAATTAGAA ATGCTCTAGG TGAAAGGGAA AGGAACAGAT 
    CTAGAACTAC AATTGGAATT AGGCCAATCA AGTACAGACC ACTGAAACTG 
    AAGACTTGAG GGGCTAATCT TTGCTAATTA ATTATTCAGT CTTAGAATCA 
    TGGCTAGGAT CATATATAAC CTAACTAATT AATCTGAACT AGAAAACAAG 
    CTGAACTAAC TATTCTTAGG TAGCTAGTTT GCTTTTGCCA ACTCTGGACG 
    CTTGTGCGGT TTCTCCTGTT GTCCTGCATG ATGCTAGACT ATTGATCATT 
    GCTGATTGCT CATACAGTCG CACTGGTATA TTGCTGTAGT AGACCACATA 
    TATATTATAA TGTTTCATGT TCAGTTACCT TTCATGTTAT CTCCATGTGT 
    GCTCATAACT AGTTAACTCC TGTCACAGCC CAAAGTCTTC AGCTTGCAAG 
    TGTCTACAAA GGGGAAGCAG AAAAGATTCT TCTGGTGAAG AAATCAGAAG 
    CAGAGGCAAA AATACCTTTC TGGTGATGGC ATTGCTAAAC AGAGGCAGGC 
    TGATGGCCTG AGACAGTACC ACAGCAAAAG AAGTCATGGA CCTAATCATG 
    GTCACGCAGT ACTTTGACAC CATAAAAGAA CTTGGGGATG GCTCGAAGAA 
    CACAACGGTG TTCATACCTC AAGGCCCAGG CCATGTCAAG GATATCAGCG 
    AGCAAATCCG GAATGGTATG ATGGAAGCGT CAAGCAACAA TGTGTAAATT 
    GTAGCGATTC ACAGAACAAG GTTGGGGATG GTTCAGATGG GAGGAGCCTG 
    TTGTTTATAA TGAATATATT ACCTTTTGTT TATAGCCTGT TGTCAAGCAA 
    CACTAGCACC TTTTGTTTGC

    Gene models with high sequence identity

    1. AT5G51570.1 [+] show detail - SPFH/Band 7/PHB domain-containing membrane-associated protein family
      E-value: 6e-31; Score: 28.90

     

    InterPro Scan Digest

    See the detailed result >

    AT5G51570.1

    Model type
    Protein coding
    Short Description
    SPFH/Band 7/PHB domain-containing membrane-associated protein family
    Computational Description
    SPFH/Band 7/PHB domain-containing membrane-associated protein family; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Band 7 protein (InterPro:IPR001107); BEST Arabidopsis thaliana protein match is: SPFH/Band 7/PHB domain-containing membrane-associated protein family (TAIR:AT5G62740.1); Has 5870 Blast hits to 5870 proteins in 1885 species: Archae - 189; Bacteria - 4209; Metazoa - 145; Fungi - 209; Plants - 268; Viruses - 20; Other Eukaryotes - 830 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR