K34514

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34514

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34514

Determination of introduced cDNA(s)

J023114A21 - Rice Full-length cDNAs - Original: J023114A21

full reading [+] show sequence

GAGTGTGTTA TCAGCAACCT GTGGGAAACA GGAAACGACG CCGGCGGCGA 
GATGTCTCCT CCGCCACCGC CGCCGCCTCC CCGCGTGGTG ATCTGCGTGG 
GAGACGTCCA CGGCTACATC TCCAAGCTGG AGAGCCTGTG GGCGAACCTC 
CAGTCCGCGC TCCCGCCCGA CGCCTTCGCC ACCGCGCTCG TCGTCTTCCT 
CGGCGACTAC TGCGACCGCG GGCCCAGCAC CCGCGAGGTC ATCGACTTCC 
TCCTCGCGCT CCCGTCCCGC CACCCCGCGC AGCGCCACGC CTTCCTCTGC 
GGCAACCACG ACCTCGCCTT CGCCGCCTTC GTCGGGGCGC TGCCGCCGCC 
GCCCGACGGC ACCCCGTTCT CGTCCACCTG GGGGGAGTAC ATCCAGAACG 
AGGAGAACGA GGGGTGGTAC CGTGGCCCCG GCCACGAGGG GATGCATTGC 
CAGGGGAGGA GATGGGGCGG GATCATGAAG GAGAAGAGGA ATCCCAAGAG 
GGGGTCATCG TACATGGGCT CCATCTACGA CGCGCGCCCT ACCTTCGAGT 
CCTACGGCGT TGCTCATGGA TCCCCAGATC TTGTGAAGGC TGTACCTGAG 
GAGCACAAAA AATTTCTGCG CGAATTGGTT TGGATCCATG AGGAGGAAAA 
TGTACCCATT GATACTAACG AAGGACAGAT TATTTGTAAG CTTATTGCGG 
TTCATGCTGG CCTGGAGAGG TCGATTGATT TGAATGAACA GTTTAGAATT 
TTGAGAACTA AAGATACAAA GATATCAAAG GTTGCAATGC TAAGCGGGAG 
GCAGGACGTT TGGAACATAC CAAAGGATCT GGCTGGCAAG CAGACCATCG 
TTGTAAGTGG ACACCATGGG AAGCTCCACA TTGATGGCCT CCGATTCGTC 
ATCGATGAAG GTGGCGGATA TGCAGACAGA CCTATAGCTG CTATTGTGTT 
TCCTTCGAAG GAATTGATCA GGAGCACAGA AGGAACTTCA TCCCAGAATC 
GATCCAGATA TCATCAGGAG TGCCCTGATA CAGCCCTGCA GGTAATTCCT 
TACTGAGGCC CTCACGTCAG CTACTGGATG ACTGATAAGT GCTCTATACA 
ACATCTGAAG GAATTTGAAT TCTGAAACAC ACCTAGCGTG CTTAGATCAA 
AACAAGAAAT CTCACATGTA AATTACTGCC GTTTCCTTTC TATGGCTGTA 
CCACTATATA CCTTGAGACC GCAAGTCCGC AACTACGAAG ATAACTCATT 
TTCCCCTTCC TTGTTGCCAT GAACAGAACA GATTATATGA TTCTCCTGCC 
TTTTCTGTTG AGAGGAAAAT GACCTGGCCT TTTGG

Gene models with high sequence identity

AT3G09970.1 [+] show detail - Calcineurin-like metallo-phosphoesterase superfamily protein
E-value: 6e-118; Score: 421.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Metallo-dependent phosphatases	2e-27
Gene3D	no description	4.4e-12
HMMPfam	Metallophosphoesterase	1.4e-12
HMMPanther	gb def: Serine/threonine protein phosphatase	0.00011
HMMPanther	Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase	0.00011

See the detailed result >

AT3G09970.1

Model type: Protein coding
Short Description: Calcineurin-like metallo-phosphoesterase superfamily protein
Computational Description: Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT3G09960.1); Has 1009 Blast hits to 1009 proteins in 371 species: Archae - 12; Bacteria - 594; Metazoa - 24; Fungi - 11; Plants - 146; Viruses - 12; Other Eukaryotes - 210 (source: NCBI BLink).
Link: InterPro Scan - TAIR