K34550

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34550

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34550

Determination of introduced cDNA(s)

  • J023079H22 - Rice Full-length cDNAs - Original: J023079H22

    full reading [+] show sequence

    Nucleotide sequence: J023079H22 - full reading
    GGAAGCTCCA GTCACGGCGG ACGCCGCCGC TGCGACGGAG ACGAGGAGGA 
    GGGCCGCCGC CTTTACATTC CATCAGCTGC GACGCCGACG CCTCCTCCAC
    CGTCGATTTG CACTTGCGCA CCTGCTTCTG CTGCTGCAGC ATCGGCTGCT
    TCTTCTTCTT TTCGTCGTCG TCGTCGTGGT TGCTGTTGCT GGACGACGAC
    GTGGGCGTCA TGGGCGCCGG TGGTGGTGGA TCGAGCAGCA GCAATGCGGA
    TTGGGGCGTC CTGACCGGGG CGTAGCGCGG CTGCGCGAGG AGTCCGTCAG
    CGGTGACACC TCGTTTCAGG GCGGTGCAGC AGGTGGCCGT CTGCGGCTGA
    CGCCGCCCAT CGTACTCGTC TTCTTCCACG CCACCTCGTT GCCGTTGCCT
    GGTCACCAGG TTGCACGTCA GGTGGTTGCT GTTGGGCTTT GATGGTGTTG
    GGCGCCTCTT CATCATCAAC AGGCAGGTGC TTGGGTTCAG GACAACAAAC
    CACCACCACC ACCGAGGAGG CAGCTGCAGC GTCCTTCTTC TTCCCCCACA
    GCAGAAGGTA CAGACCTAGG ATCATCAACA CTGATCCTAG CACGCTGCCA
    TATATCATCA TATATGCAAG GATGAAATCA ATTAATTATA TATCATGCAT
    GCATATACAT ATATATATAT ATATCGTCGT CAATGCATAG TACTATATAC
    ATATATACCT GCCGAGGTGG AGCTGCTCAT GGAGGAAGAA GAAGTCGATG
    AAGGCAACCA TGATCTGGAT GACCGGGATG AAGGCTGCCG TGAACACAGG
    GCCCCTCTTC CCCACACACC ATGTCATTAT CAGGTACCCT ACTCCAGACG
    CCATCACCCC CTGCATGCAT GCGCCCCCAC ACAATTAATT CATCTGTATA
    TATGTGCATG GTGATAGATG TACTATTAGC AAGGCATATG TAATTAATTG
    ATTAATTACC GAGTAGATGA CAGTGACGAT CTCCACTTTG TTGGTGAGAG
    TCCAGGCGGA GGCTGTGAGC CTCTCGGTGG CCAGTGTGAG CGCCCCACCC
    TGCAGCGTGC TGATGAAGAA CATGATGGCC GTGCAGGAGT AGATCGCCGG
    GTATTTCTTG GTCAGCTTCC CCTGCAGCAG CAGCCACAGC GAGAAGCACA
    GGCAGTTCCC CAGCAGCATC ACCGTCCCCA GCGTCCATTG CTTATTGTTC
    TTCACCATCA CTGACCCACC ATGTCCTCCT CCTGCAGAAG CATCCATGGC
    AGCAGCAGCT GATGGGTGGT TTGTGAGTGC CACGCCCTTG TAGAGGCTCA
    GCAACAGCAC ACCTGCCATG GACGTGAGCG TACCAAGGAC CTTGGCACCT
    CCTGCCATGC TCTTCATGTT GAGGGATTCC ACCCCTAGCG CAATGGCGAT
    GAGGAAGGTG AGCACAGGAG ACAAGTTGGC GAATGTTATC GCGTACGTCG
    CCGTCGTGTA CTGCAACCCG TAGAAGAAGC TGTACTGCGA CAGACCAGCA
    CTGCATATAC ATATAGCCAT ACATCCCTAG CTCTGAATTA TTATCACTTT
    AATTTAATTA CCATACTTCA TCAACAAATT AATAAACTAT TGCATGCATT
    TGAACTTAGA ATTGAAAGAA CAAACACAGT AGATGATTAC CCAAGCAATG
    CACTGAAGAA GAGGTATACA AATATCTCCC ATGTCATCTT AGGCCTTGTG
    TTCCTGCCTC AATTAATTAA ACATACTCCT ATTAGTACAA TAATGAATTA
    ATTCTCTGAG AGAGGAACAT GCAATTAATT GTTCATGTAT ATATATACCG
    TTCTTTGAAA TAGGCAATCG GAGATAGGAA GAGAGTGGCC ACCAGCTGCC
    GGAGTGTGAT GAGGACAAGG CGATTCAGAC CTTGTTCCAG CGCCTTCTTC
    ACTAGCGCTG TCATCACCGC AGAGATGAGG TCGAACACCA GCATTGTCAT
    CACCGTCCTA CACTCCTCAG CCTGCAACAT CATCCTAGCT AGCCTGTTAG
    TGTTTAGCAG CTAGCTACTT CTCTAATTAA CGATATATGT GATTCTCTCA
    AGTCTCAACA ATATATGTAT GTATGTAATG TGCTAGCTTC TTGCTGTAAG
    ACAGTAAACA CACTCTGCTC ATGGACTATA TATACCCACA CACACGCATG
    CTGCTGCATA GATAGCCCTG TCCCTCCACT TATTGATATT CCTCC

    Gene models with high sequence identity

    1. AT4G01440.1 [+] show detail - nodulin MtN21 /EamA-like transporter family protein
      E-value: 2e-41; Score: 167.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G01440.1

    Model type
    Protein coding
    Short Description
    nodulin MtN21 /EamA-like transporter family protein
    Computational Description
    nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G01450.2); Has 3147 Blast hits to 3133 proteins in 491 species: Archae - 24; Bacteria - 1505; Metazoa - 6; Fungi - 0; Plants - 1206; Viruses - 0; Other Eukaryotes - 406 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR