K34550

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34550

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34550

Determination of introduced cDNA(s)

  • J023079H22 - Rice Full-length cDNAs - Original: J023079H22

    full reading [+] show sequence

    Nucleotide sequence: J023079H22 - full reading 
    GGAAGCTCCA GTCACGGCGG ACGCCGCCGC TGCGACGGAG ACGAGGAGGA 
    GGGCCGCCGC CTTTACATTC CATCAGCTGC GACGCCGACG CCTCCTCCAC 
    CGTCGATTTG CACTTGCGCA CCTGCTTCTG CTGCTGCAGC ATCGGCTGCT 
    TCTTCTTCTT TTCGTCGTCG TCGTCGTGGT TGCTGTTGCT GGACGACGAC 
    GTGGGCGTCA TGGGCGCCGG TGGTGGTGGA TCGAGCAGCA GCAATGCGGA 
    TTGGGGCGTC CTGACCGGGG CGTAGCGCGG CTGCGCGAGG AGTCCGTCAG 
    CGGTGACACC TCGTTTCAGG GCGGTGCAGC AGGTGGCCGT CTGCGGCTGA 
    CGCCGCCCAT CGTACTCGTC TTCTTCCACG CCACCTCGTT GCCGTTGCCT 
    GGTCACCAGG TTGCACGTCA GGTGGTTGCT GTTGGGCTTT GATGGTGTTG 
    GGCGCCTCTT CATCATCAAC AGGCAGGTGC TTGGGTTCAG GACAACAAAC 
    CACCACCACC ACCGAGGAGG CAGCTGCAGC GTCCTTCTTC TTCCCCCACA 
    GCAGAAGGTA CAGACCTAGG ATCATCAACA CTGATCCTAG CACGCTGCCA 
    TATATCATCA TATATGCAAG GATGAAATCA ATTAATTATA TATCATGCAT 
    GCATATACAT ATATATATAT ATATCGTCGT CAATGCATAG TACTATATAC 
    ATATATACCT GCCGAGGTGG AGCTGCTCAT GGAGGAAGAA GAAGTCGATG 
    AAGGCAACCA TGATCTGGAT GACCGGGATG AAGGCTGCCG TGAACACAGG 
    GCCCCTCTTC CCCACACACC ATGTCATTAT CAGGTACCCT ACTCCAGACG 
    CCATCACCCC CTGCATGCAT GCGCCCCCAC ACAATTAATT CATCTGTATA 
    TATGTGCATG GTGATAGATG TACTATTAGC AAGGCATATG TAATTAATTG 
    ATTAATTACC GAGTAGATGA CAGTGACGAT CTCCACTTTG TTGGTGAGAG 
    TCCAGGCGGA GGCTGTGAGC CTCTCGGTGG CCAGTGTGAG CGCCCCACCC 
    TGCAGCGTGC TGATGAAGAA CATGATGGCC GTGCAGGAGT AGATCGCCGG 
    GTATTTCTTG GTCAGCTTCC CCTGCAGCAG CAGCCACAGC GAGAAGCACA 
    GGCAGTTCCC CAGCAGCATC ACCGTCCCCA GCGTCCATTG CTTATTGTTC 
    TTCACCATCA CTGACCCACC ATGTCCTCCT CCTGCAGAAG CATCCATGGC 
    AGCAGCAGCT GATGGGTGGT TTGTGAGTGC CACGCCCTTG TAGAGGCTCA 
    GCAACAGCAC ACCTGCCATG GACGTGAGCG TACCAAGGAC CTTGGCACCT 
    CCTGCCATGC TCTTCATGTT GAGGGATTCC ACCCCTAGCG CAATGGCGAT 
    GAGGAAGGTG AGCACAGGAG ACAAGTTGGC GAATGTTATC GCGTACGTCG 
    CCGTCGTGTA CTGCAACCCG TAGAAGAAGC TGTACTGCGA CAGACCAGCA 
    CTGCATATAC ATATAGCCAT ACATCCCTAG CTCTGAATTA TTATCACTTT 
    AATTTAATTA CCATACTTCA TCAACAAATT AATAAACTAT TGCATGCATT 
    TGAACTTAGA ATTGAAAGAA CAAACACAGT AGATGATTAC CCAAGCAATG 
    CACTGAAGAA GAGGTATACA AATATCTCCC ATGTCATCTT AGGCCTTGTG 
    TTCCTGCCTC AATTAATTAA ACATACTCCT ATTAGTACAA TAATGAATTA 
    ATTCTCTGAG AGAGGAACAT GCAATTAATT GTTCATGTAT ATATATACCG 
    TTCTTTGAAA TAGGCAATCG GAGATAGGAA GAGAGTGGCC ACCAGCTGCC 
    GGAGTGTGAT GAGGACAAGG CGATTCAGAC CTTGTTCCAG CGCCTTCTTC 
    ACTAGCGCTG TCATCACCGC AGAGATGAGG TCGAACACCA GCATTGTCAT 
    CACCGTCCTA CACTCCTCAG CCTGCAACAT CATCCTAGCT AGCCTGTTAG 
    TGTTTAGCAG CTAGCTACTT CTCTAATTAA CGATATATGT GATTCTCTCA 
    AGTCTCAACA ATATATGTAT GTATGTAATG TGCTAGCTTC TTGCTGTAAG 
    ACAGTAAACA CACTCTGCTC ATGGACTATA TATACCCACA CACACGCATG 
    CTGCTGCATA GATAGCCCTG TCCCTCCACT TATTGATATT CCTCC

    Gene models with high sequence identity

    1. AT4G01440.1 [+] show detail - nodulin MtN21 /EamA-like transporter family protein
      E-value: 2e-41; Score: 167.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G01440.1

    Model type
    Protein coding
    Short Description
    nodulin MtN21 /EamA-like transporter family protein
    Computational Description
    nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT4G01450.2); Has 3147 Blast hits to 3133 proteins in 491 species: Archae - 24; Bacteria - 1505; Metazoa - 6; Fungi - 0; Plants - 1206; Viruses - 0; Other Eukaryotes - 406 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR