K34605

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34605

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34605

Determination of introduced cDNA(s)

  • J023064P16 - Rice Full-length cDNAs - Original: J023064P16

    full reading [+] show sequence

    Nucleotide sequence: J023064P16 - full reading 
    GCTTCTTCCC TCGTACCATT TTCGCTGTTG GTCTTTATTG CAGCAGCTGC 
    TGCTGTTGCT CGTGCTGAGC TGAGCTGAAC CTGCCAATCT GCAACACTGC 
    AATCGTTAGC AAGTTCGCTC AACTGGCCAG CTGCTACAGA TATATCTGCT 
    GATAATTGAG CCCCAACCAC CTTTCTCTTC CCCCTTTAAA CTTCCCTGGT 
    CTCCGTCCTC TTCGATCTCC TCTGCCGTCG ATCTCATCGG AAGAGAGCGC 
    CAAGCAAGAA AGAATAATTA TTCCTGAAGA TTCCTCTTCT GCATGTTGAA 
    GTGTACAAGA CAGCCACAAC AACTGAGGAT ATGAGCTGGT GGTGTTGCAT 
    TCCAAAATCC AAGAAAGGAG AGAATCCTTA CTCTCATGGC GTTAGCGGTA 
    TTCCGCCTGA GAAAAACATA AGGCTTTTCT CTTATTCTGA GTTGAGATCA 
    GCAACAGAAA ACTTCAACCG CAGTAATAAA ATTGGCCGAG GTGGCTTTGG 
    GACAGTATAC AAGGGAACTA TTAGAAATGG GCGAGATGTT GCGGTGAAAG 
    TTCTTTCTGC TGAATCCAGG CAGGGCGTTC GAGAATTTTT GACAGAAATT 
    GATGTTATTA CCAATGTGAA GCATCCCAAC CTTGTTGAAT TAATTGGCTG 
    TTGTGTTGAA GGAAACAATC GAATTTTGGT ATACGAGTAT TTAGAAAACA 
    GCAGCCTTGA CCGTGCATTG TTGGGTTCTA ATAGCGAACC TGCAAATTTT 
    ACTTGGAGCA TAAGATCTGC TATATGCATA GGAATCGCCA AAGGACTTGC 
    ATACCTGCAT GAAGAGATTG CGTCACCGAT TGTGCACAGA GATATCAAGG 
    CTAGCAATAT ACTTCTTGAC AAGCTTTACA ACCCCAAGAT CGGGGACTTC 
    GGTTTAGCCA AGTTATTCCC TGATAATATC ACCCACATCA GTACCCGTGT 
    TGCTGGAACG ACAGGCTACC TTGCACCGGA ATATGCATGG CATGGCCAAT 
    TGACGAAGAG AGCCGATATA TACAGTTTTG GCGTCCTTGT ACTTGAGATC 
    GTAAGTGGCA AGAGTAGTTC AAGGAGTCTC CTGGCTGACG ATAAGATTCT 
    CCTAGAGAAG GCATGGGAGC TACATGAGGT AGGGAAGCTC AAGGAGCTGG 
    TGGATTCAGA AATGGGAGAT TACCCTGAAG AGGAGGTCCT CCGGTACATC 
    AAGACGGCCC TCTTCTGCAC GCAGGCGGCG GCGGCGCGGC GGCCGTCGAT 
    GCCGCAGGTG GTGACGATGC TGTCCAAGCC CATCCGCATC AACGAGCGCG 
    AGCTCACGGC GCCGGGCTAC ATCCACGACT ACAATGGCAC GGTCTCCAAG 
    GCCACCAACT CCAGCAACTC GAGGTTCAAG CACTCGGCGT CCGACACCTC 
    CGACATGTTC AGCACGGTGG TGCCACCCAC GGTGTCCGAG ATCAGCCCAA 
    GGTGAAAATG GAAGGAAAAC ATCACCAGGC TGATTGATGC TGATGCTGGG 
    TCTATGTTTC TTGTCTTACC TTTGCATGTT GAGTTGAGTG ACAGTGCATA 
    GAGGGCACAC GTTTAGATGT GTGCCAATTG TGAATCGTGT TGTTTCTTTC 
    CATTCCTTGT GCAAATTGCG GCATCTAGAT CTTGTAAATA GTAGTAGGTT 
    GATCCTGACT TGTTTACGTC AGAGCAATTC AAGATCGCTG CTTGTTGGC

    Gene models with high sequence identity

    1. AT3G09010.1 [+] show detail - Protein kinase superfamily protein
      E-value: 1e-110; Score: 397.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Protein kinase-like domain 1e-78
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMPanther RECEPTOR-LIKE SERINE/THREONINE KINASE 7.2e-172
    HMMPanther SERINE-THREONINE PROTEIN KINASE, PLANT-TYPE 7.2e-172
    HMMSmart Serine/threonine-protein kinase domain 1.3e-36
    HMMSmart Tyrosine-protein kinase, catalytic domain 4.8e-32
    Gene3D no description 1.3e-26
    Gene3D no description 1.9e-46
    ProfileScan Protein kinase, catalytic domain 37.955
    HMMPfam Serine/threonine-protein kinase-like domain 2.4e-46

    See the detailed result >

    AT3G09010.1

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G16670.1); Has 118495 Blast hits to 117144 proteins in 4669 species: Archae - 109; Bacteria - 13491; Metazoa - 44039; Fungi - 9996; Plants - 33355; Viruses - 385; Other Eukaryotes - 17120 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR