K34626

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34626

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34626

Determination of introduced cDNA(s)

J033093G21 - Rice Full-length cDNAs - Original: J033093G21

full reading [+] show sequence

GGTGGTCCCA CAACACAGTG ACAGAGGAAA CCCTCAGCTC ACAGCTCCAG 
GCGATTTTTC GTCGCCGCCA GCGCCGGCGC CGCCGCGAGC CCCGTCGACT 
CCCTCGCCGG CGGCGGCTGG ACGGGACGGA ATCTCAGGTC AACCCTCTCT 
CCCCGCCATT AGAATCTTCG CGATACTCCC CCAATCGGAG GAGAAACGAA 
ACCCTCGTCG AGAAATTTGG ACGCGCGCGA TTGCTCCTCC TGCTTGGGTT 
TCTTGGTTGC TCGAGATCTC TCTCTCTGCA ATGGCGGTCA GCTCGGAGCT 
GGAGGGCTTG CAGGACGTGG AGCCCTCCCG CTTCATCGCC TTCTCCTTCC 
CAAACCCTCT CCTCCTCCTC GACCACGCCT CCGACCCGTA CGCCCATGGC 
GGCCATGAGT TCCTCCGCGT GGCGGTTCTC GACCACTCCT CACCCCACCC 
GTCGCCGCGC ACGGCGGCGA TGCTCGTGCC GGCGGGGCGG CACCGCGACT 
GGATCTTCTC AACCCGCGCC GGCCACCTGC ACCTCCTCCT CGCCTCCCGC 
TCCCAGTGCA GCCACCTCTC CCGCCTCATC CTCGTCGGCC CCGAGCTCTC 
CGCGCCGTCT CCTTCTCGGG TGGTGGTCGT CGCCGCCGCC GCTCGCCCGG 
ACCCGGATCC TGCTCACGCG CGGCTGCTCC CACTCCTCCT GGCTCTATGC 
CCCCGTGCCG CGTTTGGGGG CGATGCTATC CCTGACGTGC CATTGCTCTC 
CTTCCATGAT GACCTCCTCC GGCTTGCTCC TGTCAAGGTT GTCGCTGGTC 
CTGTGGTTGG TGAGATGGTT GTTGAGGATG TGGCCGTCGA CTGCGCGCCA 
CGTTCGGCTG AATTGCGCCG CCGATTGCGG TTCAAGCGGA TGCCGTTCCT 
TGTTCAGACG CAGGTGCGCC TTGTGCGGCA ATTATCGCCG GGTGATTCTT 
TGATGTTAGA TGCATTGGAT GAGGTTGGAG GTGGTTCATT GCAGCCTGAG 
GTGGGTGGAG AGCTGGTCCA GCCTTACCTA CAGGCAATGG CCGCTGGTCT 
TGCGGTGATC GCCCCTTCCA TGGATGAGAG CTTTCGGTTG GGTGGCAAGC 
CGAGGTGTCT TTGTGCTGGT ATCGGTGGCG GCGCTCTTCT GATGTCAATC 
AGAATGGGGC TTCAGTGTGA TGTACTAGGG ATAGAGGCTG ATGGTGTTGT 
GCTGGATGTT GCAAGGAGCC ATTTTGGATT GGTAGAGGAT GAGTTCCTTC 
AAGTCCGTGT TGGTGATGCT ATTCAAATGA TCCAGGATTT TGCTCATCAA 
GGGGACCCTG ATATGAATTT CAGTGCGATT ATGGTGGATC TTGATTCATC 
TGATGCTATA TGTGGAGTCA GTGCACCACC GTTGGAGATG ACAAAGGAAA 
GCATTCTTCT TGCTTCACGC ACGATCCTAC ATCGTGATGG GGCTTTCATA 
TTGAATGTTA TCCCTCCTGC TGCAGATGGA TCCTTCTACA AAGGGTTGAT 
TGATGTTCTT CGCCATGTCT TCTCTGAGTT GTATGAAATA AATGTCAGTA 
ATGGTGAAAA TTTTGTCCTT GTTGCCACAG TGTCACCAGT TGAAACTATC 
CTTGCTGATA GTTCAGGAAG CGTTCTGACA AAATTGAGGA AATTAGCTGG 
GGATTTTTTG GAACACATAA CGAGAATCTG ACATTCCAAG TCACTGTATT 
GTTGCTCCAA TTGGCCTCCA CAACATCTGT CCAGAAGTTA TTTTGTTTGG 
ATTTGTTTGC

Gene models with high sequence identity

AT5G04610.1 [+] show detail - S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
E-value: 9e-58; Score: 221.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	2e-06
HMMPanther	UNCHARACTERIZED	1.3e-16
superfamily	S-adenosyl-L-methionine-dependent methyltrans	2.2e-18

See the detailed result >

AT5G04610.1

Model type: Protein coding
Short Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Computational Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: catalytic activity; EXPRESSED IN: shoot apex, sperm cell, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Spermine synthase (InterPro:IPR001045); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT2G31740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR