K34633

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34633

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • decreased size (PATO:0000587)
    (Seed::Shape::small)
  • decreased length (PATO:0000574)
    (Seed::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34633

Determination of introduced cDNA(s)

  • J013155F15 - Rice Full-length cDNAs - Original: J013155F15

    full reading [+] show sequence

    Nucleotide sequence: J013155F15 - full reading 
    GTGGGGAAAG AAAGAGCGGA AGAAAAAAAA AACATCAACA GCAAAACCGA 
    CTCCCGAGAA GCGGAGAGGG AAAAAAAAAT TCGCCCAAAT GGCGGGGGTC 
    GTCGTCGTCG TCTTCGTCTC CGATCCCCCT CTCCTCATCC GCCTCCACCC 
    CTCACATCGC CATTGCCACT GTGATCACTA GGGTTTCGCG CTGCTCCTCG 
    AGGTAAGGAT TCGCTCGCCT TCGCCGATGC GGTGGTGGAA GCGCTCGGTC 
    TCCCCTTCCC CGTCCCCGTC CTCTTCGTCC GCGTCCGCGT CCACGCCCGC 
    GTCCCCGGCG CGGGCCTCGA CCTCCCGCGT TGGCGGCGGT GTCCCCAGCC 
    GCCGCCGGGA TGTGGTGGGG TTTGGTTGGG GTGGGGGGAG TGATCCGCAG 
    CCGCGGTTGA CCAGGCAGAG GCGGCTGCGG CACGTCGACG ACATCGAGGT 
    CGGGGTCTCG GCGCTCGGGC TGGATTCCTC CCCCTCGCCC GCCGCGCCCT 
    CGTCGTGCCC CTCCAGTAGG GATTCGGTGG GGTTCGGCCT CCTGACCGCG 
    AGCTCCACGC CGATCTCGAG GACCGCGAGT AACATGGAGG TGGCGCCGCC 
    GAGGTCGTCG TCGTCTCCCG TGCTGCTGCC GCACCCGCTG CCCCTGCCCG 
    ATGAGGGGGA CTCGCCCTGC CGCGGCTCCG GGAGATCCCT CCCGTCGCCC 
    AAGCTATTCG AAGGAGACTG CAACGGGTCG GCCGTGGAGT CGAACTTGCT 
    CGGGGTTTCC GAGATCGGGA GCGACAGAGC ATCGTTGTTT CCGAGAGTGA 
    TGGCTAAAAC GGTGCAAAAA AACCCTGAGC ATGGTGACTT GCGATCAAAT 
    GGCACAAATG GGATTAACTG TGGACAACGG AGGAAGGCAT TTAAAGAGAA 
    ATTACAGGAT AAGAGCTCAG CTGAAACATT GACATTCAGA TTGAACATAC 
    CCGCTAAAAG TGCTCCAAGC AGTGGATTTT CAAGCCCTGT ACAGAGTCCT 
    CGAAGACTGA GTAGTGTAGA CTTTTTGTCC ACTGCAACAT CCACCCAAGG 
    TGCCAATTTA TCGTCAGCAC AGTCAGTCTG GTCTCCTGAT CTATATGGAT 
    CTTCACCTCG TTGTGCGTCA CCTGAAAAAA TTATGGGTAG TCAGGAGCGA 
    TCTCCTCGCT CCAGTCCATT GAGAAGCCCT GTTCTAAGAT CAAAAAACCC 
    AAGTGCACCT CCTTCACCAA TGCATCCAAA GTTGTTCCCG GAGAACCATG 
    TTTCTCGTCC TGAGGGCAAT GGGAGTGTAA ATTTCCATCC ATTACCCCTC 
    CCACCCGCCT CTGTAAGCCC AAAGCAGACG AATTTTAGTC ACCAGCCAGT 
    TCCAAAAGTT GATGCACCCT CAATGGCTGG TCAGTGGCAA AAAGGAAAGC 
    TCATTGGCAG TGGAACATTT GGATGTGTAT ATGAGGCCGC CAATAGACAC 
    ACTGGAGCTC TGTGTGCCAT GAAAGAGGTC AACATAATTC CCGATGATGC 
    TAAATCAGCT GAGTCTCTCA AGCAATTGGA GCAGGAAATA AAATTTCTTA 
    GTCAATTCAA GCATGAAAAC ATAGTGCAGT ACTACGGCAG TGAATATATT 
    GAAGATCGAT TCTACATATA CCTGGAATAT GTTCACCCTG GTTCAATTAA 
    TAAATATGTT AATCAACATT GTGGAGCAAT GACAGAATCA GTAATCCGCA 
    GCTTCACCCG CCATATACTT AAAGGCCTTG CCTTTTTACA TAGTCAGAAG 
    ATTATGCATA GAGATATCAA AGGAGCAAAT TTGCTTGTTG ATGTGAATGG 
    TGTAGTCAAA TTGGCTGACT TTGGAATGGC TAAGCATTTG AGTACTGCAG 
    CTCCTAATCT TTCACTGAAG GGAACTCCAT ACTGGATGGC TCCTGAGGTT 
    GTTCAGGCTA CACTTGTCAA AGATGTAGGG TATGATCTTG CTGTGGATAT 
    CTGGAGCCTA GGTTGCACAA TTATTGAGAT GTTCACAGGA AAGCCTCCTT 
    GGAGTGGTCT TGAAGGGCCT GCTGCAATGT TTAAGGTGTT GCATAAAGAT 
    CCGTCAATTC CAGACAGTTT ATCCCCGGAG GGGAAGGAAT TTCTGAGATG 
    CTGCTTCAGA AGAAATCCAG CTGAGAGACC AACAGCAAGC AAGTTGCTGG 
    AGCATCCATT TGTCCACAAT TCGAATAACT TCAACCAGCA CAGTGCTTTA 
    CATTCTCCCA CTGGACTTAA ATCCACCGAT ACCGGTCACA ATGCAAGAGA 
    CAAAAAGTCC TGTAAGATTG TTTCATGCAT GAGGGGGAAA AATATGATTA 
    CAACTGGTGA AACAAGCAGT GCTAGATCTC CCGGTTCATT ATCTAATCGG 
    GTGGCAGTAG GCTTGACAGC CCTGCCAAAT TTGGAAACTC GTAGCTTATC 
    CCCTACGCCG ATGAGTTTGA GGTCCAGTCC TGGCTCTGCG GCCCATACAC 
    CTAGTATGCA CTTTTCTATC GCATACCATC AGCCTAGTCC ATTGCCAAGG 
    CCAAATGGAA AGGAAGCAAT AAATTTGTTC ACCTTGAAGC ATGACGAGCT 
    GCCTACCTAA GGTGCGGAAA CACATCATCT GTCCATCCAC CCAATCTGTT 
    GGATGCGAGC CCATCTCTAA CTTCTGATCC CTGTACTGCC AGTCATCATA 
    ATTGAACATT CGCTGGGTCT TGTAAAGTAC TTGGCATGCG AAGGACATCA 
    GCACGGTACG ATCGCAATAG CTTCTGAAAC CTGTAATGTT TGTTTTCAAG 
    GAAATGATGG CGTTTCCTTT GTAAGATATT ATTTAGGGTT AGCTGTAGGT 
    TAAACTAATG GCCCTGATTG TTGCCAACAG GTAGGACACT AGGGTTGTAG 
    TTGTAGCTTG TGTTGTTTTT GCTATTGTGT AACCACACCA CGATGTAATC 
    ATTGTTGATT TTTTGAGGCC CAGTAATAAT GATAAAGAGT TGGC

    Gene models with high sequence identity

    1. AT5G66850.1 [+] show detail - mitogen-activated protein kinase kinase kinase 5
      E-value: 2e-126; Score: 451.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Serine/threonine-protein kinase-like domain 2.1e-67
    superfamily Protein kinase-like domain 2e-87
    ProfileScan Protein kinase, catalytic domain 51.848
    Gene3D no description 1.8e-59
    HMMSmart Serine/threonine-protein kinase domain 2.3e-99
    HMMSmart Tyrosine-protein kinase, catalytic domain 1.1e-26
    PatternScan Protein kinase, ATP binding site 0
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMPanther MITOGEN ACTIVATED PROTEIN KINASE-RELATED 4.1e-167
    HMMPanther MAPKK-RELATED SERINE/THREONINE PROTEIN KINASE 4.1e-167

    See the detailed result >

    AT5G66850.1

    Model type
    Protein coding
    Short Description
    mitogen-activated protein kinase kinase kinase 5
    Curator Summary
    member of MEKK subfamily
    Computational Description
    mitogen-activated protein kinase kinase kinase 5 (MAPKKK5); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G63700.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR