K34644

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34644

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34644

Determination of introduced cDNA(s)

  • J013169E20 - Rice Full-length cDNAs - Original: J013169E20

    full reading [+] show sequence

    Nucleotide sequence: J013169E20 - full reading 
    GAGCCGGTGT TCTACTGGCG ACTGGCCTCC TCGAGTTCTT GATCTTGGCG 
    GATTGCCGTC CATGGAGACC ACACGAAGCG ATGGCAGCAT CATGGTGGTA 
    GGGGCGGTCG ATATCGATTG CCCCCAGCAC CGGCTGTGCG GGTACCGCGA 
    CTTGATACGG GGCGTCTCCG GCGGCGGCGC CGCCATGTCG CGCTGGCCGG 
    AGGCGGCGCC CTTCGTCCCG CAGATCGCCA GTACTGGTGG CGATGGTGGT 
    GCAGCGGTGG CCGGCGGCGG CTGGTCGAGC GGGAGCTCAA GCCCGGCTCC 
    ATCGTCTTGC AGCTCCTCCT CCTCTTGGCG CGAGGGAGAC TGCTGCTACG 
    ACGTCTGCTG GTGTTCTTCT TCCACGGTCC ACGAGCTTCG CAGCATCGCG 
    GAGCGGATGG TCCGTGACGG CTACATCGAG GGGCTCATCA GGGCTTTCGG 
    TGGCGCGGCC ACTGCCGGAG CCGCCGGACG GCGTGGCCCC CCAGACGAGC 
    TTCTCCTCCA TAACTGGTTC TCGCAGCTCG ACGTGGAGTG GGTCCTGCTC 
    CTCCATACCT GCAGCGAGGA AGAAGAAGAC GAACACGTAC GACGACCTCC 
    TCCTCTTCCC GTGGAAGATT TGATGGCGCT TATGGAGCGG TGGATCCGAG 
    CCCTCCTAAC CATGGTGCAG GTTCTCTGCA TCACGCAGCT CGAGCTCCGC 
    GCCAAGAAGC CAACCGTCGC CGGAGTCCGG AGAGCCATCC AGTTCTTCCT 
    GCTCCGCCGC GACAGCAAGA CGGCGCACGC GGACTACGTG CAGCAGGTGG 
    TCCAGTTCGC GCGGTTCGCG GAGGAGAGCA TCCTCAGGAT GCTGGCCTTC 
    GTCGACGCCG CCACTCTCGC CGTCGTCGAG GAGGACGACG ACGACCACCG 
    GGTGGCCGAG GCGCTCCCGG GGATGTTGCA GGTGTACGCC TGCATCTCCG 
    AGGCCTCTCC GACCGTGCTC GCCATGTTCA AAGAAGCATC CGATCTCCTC 
    GCTTCCGGCT CCTCCCGCCA TGGCCAGGAG GCACAGGTTT TCGACGGCAT 
    GGACGGCATC TTCCTGCGCA AGAGGAAGAA GCTGAGCGAC GCGATCTGGG 
    ACATGATGGA GAAGGTTCGA TCCTCCTTCT TGCAGGATGG ATGCTGGCAA 
    GTCTCGCCGG AGGCATCAGC ATCAGGAGTC CATGAGACCA CCGTGCTGAT 
    GATGAACTAC ATCGCGCTTC TCTGGCGCAA CGACGACGTC CTCACCTTCA 
    TCCTGCAGGA TCACCACTTC AGCGTGTTCG TCTCTCACAC CCAGGGCTTC 
    AGCTCGGTCG TGAACCTGAT CACCGACATC ATCTCTTGCC TTGGCCACAA 
    ATTGGAGGAA ATTGCCTCCT CCCTTTCCAA TTCCATCTTG GACCCAGCGT 
    TGCGTTGCAT TTTCTTGCTA AACAATTGGC AGCTTGTGTT GCACCGCATC 
    GAATCCCTGG ACCTGCCATC TTGGGCCTTG ATAGACAGAT GCAGGACACG 
    GAGGTACATA GACACTTACA TTGACGTCTT CTGGTCGCCT ATGTTGTGCT 
    GCATCTTCAT CGGAAATTCT TCTGATACTC CTCGAAAGAA AACCTACAGA 
    CCTGCTTTCG GCTTCCGAAG ATACCTGTCT CTTGAAAATT TTGAGATAGA 
    ATTCAGAAAA ACCTACGCGA AGCACAAGTT TTTCAAGGTT CCAGACCCTA 
    AGCTTCGGCA GAGATTACGT CAAGCCATCA TCCAGAAAAT CATTCCGCAT 
    TATAGCATGT ATCTGGAGGA GCGAGCAGCA AGGGGAATGC ACAATCGACC 
    TCCCAAAATT ACTCCTGAGC AGTTGAAGGA GCTATTAGAA GAATTATTCG 
    AAGGTTGAAG CAGATGAATT TCAGTGGAAT AAATGGCTAT ATATTTAATT 
    AGCACTCACC GTTTTGTCAC CCTAGCTTGG GTCGTAGGTT TGAAGGTTTG 
    TGCTCCGGCC AGCAATTAAG GTGTGGTTTG TCTTCTTTGG ACTTTGGTGA 
    TTATGGTGAG AGTATAATTC ACCAAGTTCC TGCAAACAGA AACTTGGTTA 
    GTCTTGCCTT ATTCGCCGGA GACCTTACTT AGTCTTGCCT GCTTGTGAAG 
    ATGGGGGTTA CTAAAACTGT TGAAATGAGT TTTACTTAAA TGTTACAAAT 
    TTAATTATTT CCGTTGTACA GATAATCC

    Gene models with high sequence identity

    1. AT1G07725.1 [+] show detail - exocyst subunit exo70 family protein H6
      E-value: 2e-12; Score: 72.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther EXOCYST COMPLEX PROTEIN EXO70 1.4e-21
    HMMPanther Exo70 exocyst complex subunit 1.4e-21
    HMMPfam Exo70 exocyst complex subunit 4.7e-103

    See the detailed result >

    AT1G07725.1

    Model type
    Protein coding
    Short Description
    exocyst subunit exo70 family protein H6
    Curator Summary
    A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.
    Computational Description
    exocyst subunit exo70 family protein H6 (EXO70H6); INVOLVED IN: exocytosis, vesicle docking involved in exocytosis; LOCATED IN: exocyst; CONTAINS InterPro DOMAIN/s: Exo70 exocyst complex subunit (InterPro:IPR004140); BEST Arabidopsis thaliana protein match is: exocyst subunit exo70 family protein H5 (TAIR:AT2G28640.1); Has 846 Blast hits to 838 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 137; Fungi - 47; Plants - 645; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR