K34648

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) increased width (PATO:0000600) (Rosette leaf::Shape::wide) dark green (PATO:0001249) (Rosette leaf::Color::dark) present in fewer numbers in organism (PATO:0001997) (Rosette leaf::Number::few) abnormal (PATO:0000460) (Rosette leaf::Others)
	stem (PO:0009047)	abnormal (PATO:0000460) (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34648

Determination of introduced cDNA(s)

J013058G08 - Rice Full-length cDNAs - Original: J013058G08

full reading [+] show sequence

GTTAGTGAAG TTTATTGAAT CATGTTTATA CTTTATATTT TTTTTCCAAG 
CCTAGTGATC TTTGTTACTT GCATTCACAG TTCTCAGTAA CAGAGCATTT 
TAGAGATGGG AATATTCGCC CCAAACCCCA GCCTGGAGTA TTTTTCTTCT 
ATGATTTCTC ACCCATAAAG GTAGTAACAA TGGAGAGAAA TTCGTATGTA 
GTCATGTTCA TTTTTCTCTT TTTATGATTC TATCTTAGCT TGCTCTACTC 
ATCTTCTCAA CCTGTGGATA TGTGTTGCCA AGCTCATCTG TTGAATGGCT 
GGCTGTGTTG GTGTGACCAT TCTTGCTGCA CATGCAGAAT GCTCCAAATT 
CACCATCTGT TATTATTCAG TACTATTTAA TTACTTTGGA CACAAGAGAA 
GTCTACAATA CCTTTGTTTC ACCTTTATCT ATTCTGACAC TGCAGGACCA 
AACTGGAATT TGTAGGCTTT AGGTCATGGA GAGTTTCTAA AGTTAGTTAT 
TATACTAGTC AGTAGCTAAA AGAATCAGTT CATTGATGAG ATATATCTGT 
TAGGAGTATC CTAGCATAAA ATTTGGTATT ATCCTTTTAT TATTTTTATT 
ATTTGCTGAA TGGCTCCAAA AATGTCTGCA TATGCATCGT AACACTTTGA 
ATACAAAATT GACAGTGCAT GTCTATACTC ATTCAAAAGC CTCTAGTGGT 
GGTGGCAGGG AATTTGCCAC CCCACTATTG CTTTTTGCAG TTTTTACAAA 
TTGTCCCCTG ATATTTTTCT AATATTGTGG AATAGTTCAA TATTTGGTTC 
AAACAAGTGA ATAGCAGATA ATGAAATAAA CAAACAATTG ATACTAAGAT 
ATTTGATAAA ATATATATTT TTCTTACATA TTATGATATT GTTTTTCTTC 
TGCCCATAGC AAAGCTTGGG CATTTTGCTA GTACTCAAAA GTCAAAACTT 
ATACATGTGG ATAACATACA GTTTCGTATC AATATAACGA TTAACTAATT 
CTCATATTCT CTTATCAGAT TGAAAGGTAC TCCTTTTAAG TTTTAACTCT 
TTAGTTCTGT GACCCACTAA AATCTTAGTT CTCCACCTTA TGTTTTTGCA 
GGTAATATTT ACAGAAGAAA ATAGTTCCCT GCTCCACTAT CTGACGAACC 
TATGTGCTAT AGTGGGAGGG GTTTTCACCG TCTCCGGCAT CATTGACTCG 
TTCATATATC ACGGGCAGAA GGCACTCAAG AAAAAAATGG AGCTAGGCAA 
GTACAGATGA TTTACCTGAA ACATGGACTG GCCCTCATGT TCCCCAAGTT 
CCCAAGTTCC GTGGCTTGTA AAGGATCCAT TGCTTAAGAC CTGAAGACGT 
TGCTTTGCTG GAAGGTTTTG CTAAGGCCAT CAGAATTGAC GATATTGCAC 
ATTAGTTGAT CAAAAACTCG TTTACATGTA AAAAAAGACA ATATCATAGC 
GTTGGGCCTG GGGGAGTGCT TTGATGTCTC AGTGAGACTC TTTTTGAGTG 
GCCAAAACTG GCGAAATGAG ATGGATAGAT TAAATC

Gene models with high sequence identity

AT1G36050.2 [+] show detail - Endoplasmic reticulum vesicle transporter protein
E-value: 1e-18; Score: 91.70

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Protein of unknown function DUF1692	1.4e-08
HMMPfam	Protein of unknown function DUF1692	4.5e-09
HMMPanther	SEROLOGICALLY DEFINED BREAST CANCER ANTIGEN N	7.7e-08
HMMPanther	SEROLOGICALLY DEFINED BREAST CANCER ANTIGEN N	7.7e-08
HMMPanther	SEROLOGICALLY DEFINED BREAST CANCER ANTIGEN N	2.6e-24
HMMPanther	SEROLOGICALLY DEFINED BREAST CANCER ANTIGEN N	2.6e-24

See the detailed result >

AT1G36050.2

Model type: Protein coding
Short Description: Endoplasmic reticulum vesicle transporter protein
Computational Description: Endoplasmic reticulum vesicle transporter protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Endoplasmic reticulum vesicle transporter protein (TAIR:AT1G22200.1); Has 1261 Blast hits to 1092 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 439; Fungi - 275; Plants - 277; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink).
Link: InterPro Scan - TAIR

J033072O04 - Rice Full-length cDNAs - Original: J033072O04

full reading [+] show sequence

TTGTGTGTGC GCGAAGCAGC CGCCGCCGCG CGGATGTTGT GTGCTGTTCG 
CGTACTCTCC CATCCGTGGC CGTAATGGCT CGATGTGGTT TGGAATTCGA 
GGAGTTGGTT CTTGCCAACA AGATCAAAGT CGGATTTCGA GTTGTCGATG 
GGGATGGGGA TTTAGAGTAA GATTTGAATT CAATGATGCG GTGGGCGTGT 
TCCTGCTGCT GCTGCATGCT TGAATGTTTG GAATATTTCC AGGGGCACCT 
GACCGCGCTC TTGGTAATTT CTAGAAGAAG GTGCCCTTTT AGGTAGACAG 
GTTTTGCGGT GTGTCAGGGT AACGAACTAA AGATGGGCAT GTTGCGATGG 
GCATTGACGC TAATGGTGAT GTATGCTGCG CGCGATTTTT CTTTTCTTTT 
TCTTTTTCCT TTTCGGGTGT GAGATTCCTG AAAAGTTCAG GAATGCTTTT 
GGCTGAGTTC CTGCGTCTCT GAGGAAGATA AATTAGTTTA TTTTTTTCTG 
CTATTACTTG GATTTATGTG CTGCTATCAC TGTTGGTTCG TGAAGGGTAA 
GTTTTTGTGT TGTTGGCTCT GCATGTTGGA TCATGCGTGC AAAATTAGGT 
CGTCACAAGG ATTATGCCGT TTTCAAGTTA CCTTTTGAGT AAAGTCTGTT 
GTTGCAAAGG TTCTGTTTTA TTTGGCCAGC ATGGCCTTAC ATTACTTTGG 
AGTTTGGAGA ACAAGAGGTT ACAAGTTGTC GAATTTTTAT GCTCTTTTTG 
TTTGGTGCAA TTTGTTAGTG TTTATTTTTT TAAAAAAATT CTGGTAGTGA 
GAAGGTTCTT TCATAAAATG TTTTTGCAGG GTCATATTTT TATTCAGCAA 
CAGAGACTAA GCTAGTGGTT GACACATCAA GAGGGGAAAG GCTACGAGTT 
AATTTTGACG TAACTTTTCC GAGTGTTCCC TGCACCCTTC TCAGTGTTGA 
TACCATGGAT ATTAGTGGAG AGCAGCATCA TGACATTAGG CATGATATAG 
AAAAGAGGCG ATTAGACGCA CATGGTAATG TCATTGAGGC TAGAAAAGAA 
GGCATTGGTG GAGCAAAGAT AGAGAGTCCA TTGCAAAAAC ATGGAGGAAG 
ACTCAGCAAA GGTGAAGAAT ACTGTGGCAC GTGTTATGGT GCTGAGGAGT 
CGGATGAACA ATGCTGTAAT TCTTGTGAAG AAGTTAGGGA AGCATATAAG 
AAGAAAGGAT GGGCCCTTAC AAATCCTGAT CTGATTGACC AGTGCACCAG 
AGAAGATTTT GTGGAAAGAG TTAAAACTCA ACAAGGTGAA GGTTGTAATG 
TACATGGCTT TTTAGATGTC AGCAAAGTTG CAGGGAACTT ACACTTTGCT 
CCAGGCAAAG GATTTTATGA GTCAAATATA AATGTGCCTG AGCTGTCGGC 
ACTTGAGCAT GGTTTCAACA TCACACACAA AATAAATAAA CTGTCTTTTG 
GGACAGAATT CCCTGGTGTT GTTAATCCAC TTGATGGTGC TCAGTGGACA 
CAACCAGCAT CAGATGGGAC ATACCAATAC TTCATAAAAG TTGTTCCTAC 
AATTTACACT GATCTAAGAG GGCGCAAGAT TCATTCCAAC CAATTCTCAG 
TAACAGAGCA TTTTAGAGAT GGGAATATTC GCCCCAAACC CCAGCCTGGA 
GTATTTTTCT TCTATGATTT CTCACCCATA AAGGTAGTAA CAATGGAGAG 
AAATTCGTAT GTAGTCATGT TCATTTTTCT CTTTTTATGA TTCTATCTTA 
GCTTGCTCTA CTCATCTTCT CAACCTGTGG ATATGTGTTG CCAAGCTCAT 
CTGTTGAATG GCTGGCTGTG TTGGTGTGAC CATTCTTGCT GCACATGCAG 
AATGCTCCAA ATTCACCATC TGTTATTATT CAGTACTATT TAATTACTTT 
GGACACAAGA GAAGTCTACA ATACCTTTGT TTCACCTTTA TCTATTCTGA 
CACTGCAGGA CCAAACTGGA ATTTGTAGGC TTTAGGTCAT GGAGAGTTTC 
TAAAGTTAGT TATTATACTA GTCAGTAGCT AAAAGAATCA GTTCATTGAT 
GAGATATATC TGTTAGGAGT ATCCTAGCAT AAAATTTGGT ATTATCCTTT 
TATTATTTTT ATTATTTGCT GAATGGCTCC AAAAATGTCT GCATATGCAT 
CGTAACACTT TGAATACAAA ATTGACAGTG CATGTCTATA CTCATTCAAA 
AGCCTCTAGT GGTGGTGGCA GGGAATTTGC CACCCCACTA TTGCTTTTTG 
CAGTTTTTAC AAATTGTCCC CTGATATTTT TCTAATATTG TGGAATAGTT 
CAATATTTGG TTCAAACAAG TGAATAGCAG ATAATGAAAT AAACAAACAA 
TTGATACTAA GATATTTGAT AAAATATATA TTTTTCTTAC ATATTATGAT 
ATTGTTTTTC TTCTGCCCAT AGCAAAGCTT GGGCATTTTG CTAGTACTCA 
AAAGTCAAAA CTTATACATG TGGATAACAT ACAGTTTCGT ATCAATATAA 
CGATTAACTA ATTCTCATAT TCTCTTATCA GATTGAAAGG TACTCCTTTA 
AGTTTTAACT CTTTAGTTCT GTGACCCACT AAAATCTTAG TTCTCCACCT 
TATGTTTTTG CAGGTAATAT TTACAGAAGA AAATAGTTCC CTGCTCCACT 
ATCTGACGAA CCTATGTGCT ATAGTGGGAG GGGTTTTCAC CGTCTCCGGC 
ATCATTGACT CGTTCATATA TCACGGGCAG AAGGCACTCA AGAAAAAAAT 
GGAGCTAGGC AAGTACAGAT GATTTACCTG AAACATGGAC TGGCCCTCAT 
GTTCCCCAAG TTCCCAAGTT CCGTGGCTTG TAAAGGATCC ATTGCTTAAG 
ACCTGAAGAC GTTGCTTTGC TGGAAGGTTT TGCTAAGGCC ATCAGAATTG 
ACGATATTGC ACATTAGTTG ATCAAAAACT CGTTTACATG TAAAAAAAGA 
CAATATCATA GCGTTGGGCC TGGGGGAGTG CTTTGATGTC TCAGTGAGAC 
TCTTTTTGAG TGGCCAAAAC TGGCGAAATG AGATGGATAG ATTAAATC

Gene models with high sequence identity

AT1G36050.2 [+] show detail - Endoplasmic reticulum vesicle transporter protein
E-value: 6e-114; Score: 409.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Protein of unknown function DUF1692	2.7e-65
HMMPfam	Protein of unknown function DUF1692	1.4e-08
HMMPanther	SEROLOGICALLY DEFINED BREAST CANCER ANTIGEN N	6.9e-128
HMMPanther	SEROLOGICALLY DEFINED BREAST CANCER ANTIGEN N	6.9e-128
HMMPanther	SEROLOGICALLY DEFINED BREAST CANCER ANTIGEN N	2.6e-24
HMMPanther	SEROLOGICALLY DEFINED BREAST CANCER ANTIGEN N	2.6e-24

See the detailed result >

AT1G36050.2

Model type: Protein coding
Short Description: Endoplasmic reticulum vesicle transporter protein
Computational Description: Endoplasmic reticulum vesicle transporter protein; FUNCTIONS IN: molecular_function unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1692 (InterPro:IPR012936); BEST Arabidopsis thaliana protein match is: Endoplasmic reticulum vesicle transporter protein (TAIR:AT1G22200.1); Has 1261 Blast hits to 1092 proteins in 204 species: Archae - 0; Bacteria - 0; Metazoa - 439; Fungi - 275; Plants - 277; Viruses - 0; Other Eukaryotes - 270 (source: NCBI BLink).
Link: InterPro Scan - TAIR