K34803

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K34803

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K34803

Determination of introduced cDNA(s)

J013046H22 - Rice Full-length cDNAs - Original: J013046H22

full reading [+] show sequence

GGCCTTCTCT TCTACTCCCC CCACCACCCC CGCCTTCGTG CTTGCGTGTC 
GTCGCCTCAC CTCGCGCCTC CGCTACTACT GCTTGTCTGC TGCTGCAGCT 
GCTGTTATTA CCATACCGCG GGAGAAGGGG GGCCGAACCC GAAGGCGTGC 
GAGAGGGAGG TGAGGTGAGG TGGAGCCGTG GAGGCGCTTG TTTCGCGTGC 
GAGACGGTGC TTCGTTTCGC CTCACGTTTT CCGAGGGCTA CGGCGACTTG 
GTGGGAGCGC GGAGAAAATC TAGCGAGCCG TCGGAGTTGG GTGGCGCGCG 
GCCGGCTGTG CTTCTGAAGG AGGAGTAATT GGAGTAGTTG CTTGCCATGG 
CCGAGATCTG CTGCGAGGAG GCCATGTCGC CGCCGGCCAC TGCCACGGCT 
GCTGTCGCGG CAGCGGTCTC CGCCTCGGCC GCCGCAGCCG TCTCCTCGGC 
GATAGACAGG CGGCGCCGCA GGATGGAGAT GAGGCGCATC CGCATCGCAA 
GTGATCTCGA GCTGCAGGCC GGAGAGGATG GGCGCCCTGG AAAGCGGCAG 
AGGCTGGCGC ACACGGCGTC TGGCGCCCCG CGTCCTGACG AGGATTCGGC 
GTCTGAGCGG CCGAGTTGTG GCCGTACGGA GGAGTTCCCG AGGTATGGGG 
TCACCGCTGT GTGCGGCCGC CGTCGCGAGA TGGAAGACGC CGTGTCCATC 
AGACCGGACT TCTTGCCGGC ATCCGGCAAG TTCCATTTTT ACGGCGTCTT 
CGACGGCCAT GGCTGCTCCC ATGTTGCGAC GACGTGCCAG GACAGGATGC 
ACGAGATTGT CGCCGAGGAG CACAACAAGG GGGCCTCCGG CGAAGTGGCG 
CCTTGGAGGG ATGTGATGGA GAAGAGCTTC GCGCGGATGG ATGGGGAGGT 
CGGTAACCGG GCGTCCACCC GCAGCGACGA CGAGCCCGCC TGCCCGTGCG 
AGCAGCAGAC GCCTTCGCGT CGCGACCACG CGGGTTCCAC CGCCGTCGTC 
GCCGTCGTTA GCCCAACACA GGTCGTCGTC GCCAACGCCG GCGACTCCCG 
CGCCGTCATC TCCCGTGCCG GCGTCCCCGT CGCACTATCC GTTGACCACA 
AACCCGATCG GCCCGACGAG CTGGAACGAA TCGAGGCGGC GGGCGGCCGC 
GTCATTTACT GGGACGGCGC CCGGGTGCTC GGCGTCCTCG CCATGTCTCG 
AGCCATCGGG GATGGGTACC TTAAGCCGTA CGTGACGTCG GAGCCGGAGG 
TGACCGTGAC GGAGCGCACC GACGACGATG AGTGCCTGAT CCTGGCCAGC 
GACGGGCTAT GGGACGTCGT GACCAACGAG ATGGCGTGTG AGGTCATGAG 
GGCGTGCTTC CACAACAACG GTCCGCCGGC ACCGGCCGCG CGGCCGAGCG 
GCGTGCCCTC CTCGGCCGAG GCGGCGGAAA CCGAGAACGG AGGAGCCGCA 
TCGGTGAAGG GGATAAGCAA GGCGGAGTCC TCCGACAAGG CGTGCTCCGA 
CGCGGCCATG CTGCTGACGA AGTTGGCGCT GGCGCGGCGG AGCGCGGACA 
ATGTCAGCGT CGTCGTCGTA GATCTCCGCC GGGGATTGTG ATTCTTGGCG 
CAATATTCTA TGCTCCATGA TTGCTTTCTT TCTTCTTCTT TTTTTTATTC 
TAAGTTAATT TTTCCCTTCA AATTTCTTCC TTATTTCTCT GTTTAGTTTT 
AGTTCTACTA CTAGCTCCTA CCAAGATAAA TGAATATAAT AGCCTTTTTT 
TTCGC

Gene models with high sequence identity

AT1G07430.1 [+] show detail - highly ABA-induced PP2C gene 2
E-value: 5e-88; Score: 322.00

InterPro Scan Digest

Program	Description	E-value
HMMSmart	Protein phosphatase 2C-related	4.3e-93
superfamily	Protein phosphatase 2C-related	5.8e-77
Gene3D	Protein phosphatase 2C-related	7.7e-73
HMMPanther	PROTEIN PHOSPHATASE 2C EPSILON	2.3e-116
HMMPanther	Protein phosphatase 2C	2.3e-116
HMMPfam	Protein phosphatase 2C, N-terminal	6.6e-64
PatternScan	Protein phosphatase 2C, manganese/magnesium aspartate binding site	0
Coil	coiled-coil	0

See the detailed result >

AT1G07430.1

Model type: Protein coding
Short Description: highly ABA-induced PP2C gene 2
Computational Description: highly ABA-induced PP2C gene 2 (HAI2); FUNCTIONS IN: protein serine/threonine phosphatase activity, catalytic activity; INVOLVED IN: protein amino acid dephosphorylation; LOCATED IN: protein serine/threonine phosphatase complex; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Protein phosphatase 2C, manganese/magnesium aspartate binding site (InterPro:IPR000222), Protein phosphatase 2C-related (InterPro:IPR001932), Protein phosphatase 2C (InterPro:IPR015655), Protein phosphatase 2C, N-terminal (InterPro:IPR014045); BEST Arabidopsis thaliana protein match is: highly ABA-induced PP2C gene 3 (TAIR:AT2G29380.1); Has 6753 Blast hits to 6737 proteins in 407 species: Archae - 6; Bacteria - 193; Metazoa - 1700; Fungi - 794; Plants - 2782; Viruses - 7; Other Eukaryotes - 1271 (source: NCBI BLink).
Link: InterPro Scan - TAIR