K35028

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35028

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35028

Determination of introduced cDNA(s)

  • J033074L09 - Rice Full-length cDNAs - Original: J033074L09

    full reading [+] show sequence

    Nucleotide sequence: J033074L09 - full reading 
    TGGGGAGACA GAGAGACTGA ACTGAGCTCA AGCCGCTCCG GGATCTCCAT 
    CTTGAGTTAT CCAAGAACTG AGAGTGCTCC CGGCTCCTAC ATTTGCCCTC 
    TTTGGGCACC AATAATTGGA GGAGCAGGCT GTGGATTCTT GATTTCTTGG 
    TGGCTGGAAT CCTTTCAATT ACAGACAAGT TGCAGGTTGC TTCAGGTTCT 
    TGAAATTGTA ATTTGGTTGG TTGCCTGCGG TCCCTACTTC CTGGAGCTTT 
    GCTTATTTCT AAGAATCTTT TAATGCTCAA AACTGCTTCA ATTTCATTAT 
    TTTGGGAGAG TAATCACCTC AGTGGTTGAG CGCTGGTGAT GCTAAAGTTG 
    GATGATGGAG GTAGCTGATA AGATTGTGGA GCCAAAGGGC CCTTTGGTGG 
    CCACTGCTCA GCTGCCAAAT AATGTAGAGT TGCTCAAATC AGTTGTGCTG 
    AATCCATCAA GGGAAGGGGG AAGCTCACAA GAGCAGTATG AGAAGGATCT 
    GTTGGCAGAA GGTGAGGAGA GTTTTCGGAG CGAGGAGTCA TCTGACGAGG 
    GTGGCCGGAG TTCATTCTCC GGGGTGAGCC ACCCTCCGGA GCCAATTGAT 
    GTGGATCTTA TGAGCACGGT GTATGTCGCG ATCGACGAGG AGAAGCCTGA 
    GCCACCCGAG TGCTTGATGC GAGGCCTATC GGTCAAAGGA GCATCTATGG 
    AGGACCTCTC AGTCCATGCC ATGGATGCAA AGCCGGATGT GATTGTTTGC 
    ACAGTTAATG TCAATGGTTT GGTTGAAGAG AGGAAGGTGC ACTGTGCTGT 
    GGTAGCACCA GATGCTGTTG AAGCCGTATC CTCAACTCAG GCCTCGGAGG 
    AGAAGGATTG CGTCTGGGAT GCCTCCTTCC CTCCCAGTGG CAATGTCAGC 
    CCACACAGTA GCAGTGACAG CACTGGTGCG GTCGCTGCCA CAAGCATCAG 
    GGGAAGATCC ACAAGCACAT GTAGAAGTGG AGTTCTAACT AGTGAATCCA 
    TCCTTACCGT GGAGAAGACA TGTGAGAGCG CAAAGGATAG CACCCGAGGC 
    AACTCAATGG AAAGCACAAA GACCAGCATG AGTCGAGCGA GTGATAGTAG 
    TGGCGTTAGC GATGACAGCA ACTGGAGTAA CATCACAGGA AGTGCTAACA 
    AGCCTCACAA GGGCAATGAT CCTAGATGGA GGGCTATTCT AGCTGTCCGG 
    GGTCGGGGCA ATGTCCTTGG GATGAGCCAT TTTAGATTGC TCAAGCGTCT 
    TGGCTGTGGT GACATTGGCA GCGTCTACCT CTCAGAGTTG AGTGGGACAA 
    GGTGCTACTT TGCGATGAAA GTAATGGACA AGGCGTCCTT AGCAAGCCGA 
    AAGAAGTTGA ACAGAGCTCA AACTGAAAGG GAAATTCTGC AGCTTTTGGA 
    TCACCCATTC CTTCCAACTC TGTACACACA CTTTGAGACT GACAGGTTCT 
    CATGTCTGGT CATGGAATTC TGTCCGGGTG GTGATCTGCA CACTCTGCGG 
    CAACGGCAGC CACGAAAGCA TTTCTCTGAA TATGCAGCAA GGTTTTATGC 
    CGCTGAGGTG CTCCTAGCTC TGGAGTACCT GCACATGCTG GGCGTCGTCT 
    ACCGGGACCT GAAGCCGGAG AACGTCCTGG TGCGCGATGA CGGCCACATC 
    ATGCTCTCCG ACTTCGACCT CTCTCTGCGG TGCGCGGTGT CGCCGACGCT 
    CATCAGAGCG TCGGCGTCCG ACTCCGATCC CAGGAGAGCC GGCGGTTCGT 
    TCTGCGTGCA GCCTGCTTGC ATGGAGCCTT CTTCGGTGTG CATCCAGCCG 
    GCGTGCTTCA TGCCCAAGCT GTTCGGCCAG AGGAGCAAGA AGCAGGGCCG 
    GAGGCCGAGG TCCGAGTTGG GGCAGGGCGG TGGCGCCGCC CTGCCGGAGC 
    TCGTCGCCGA GCCGACGTCG GCGCGGTCAA TGTCCTTCGT GGGGACGCAC 
    GAGTACCTGG CGCCGGAGAT CATCAAGGGG GAAGGCCACG GCAGCGCCGT 
    GGACTGGTGG ACGTTCGGCA TCTTCCTCCA CGAGCTCCTC TACGGCAAGA 
    CGCCGTTCAA GGGGTCGGGC AACCGCGCCA CGCTGTTCAA CGTGGTCGGG 
    CAGCAGCTGC GGTTCCCGGA GTCGCCGTCG ACGAGCTACG CCGGGAGGGA 
    CCTCATCAGG GGCCTCCTGG TGAAAGAGCC GCAGCAGCGG CTCGGCGTGA 
    AGCGTGGCGC CGCCGAGATC AAGCAGCACC CCTTCTTCGA GGGCGTCAAC 
    TGGGCGCTCA TCCGGTGCAG CACGCCTCCC GAGGTGCCCA GGCATGTCGA 
    GGCCGAGCTG CCGGCCAAGT ACGGCGTGGC CGAGCCGGTG GCGAGCGGCG 
    GCGGAGGCGG CAAGAGGGTG GTCGGCGCCG AGGTCAGGTC CGGCGGGAAA 
    TACCTCGACT TCGAATTCTT TTAGATTATG AATGAGTTGC TGAATGCCCA 
    GTCTCACTAG TGTGTGCATT TTAGGTGTGG TGTCTCATTG TAGTTTTGCA 
    TGCAGTGTTC CTTCCTGGAT CAATGTAACC AGTGTTAGAT TTAGCGCGAT 
    TTTAGTGCGC AATGTATCCA ACACTCTGGA ACCCAGGGAA AGAAATAAAT 
    CAG

    Gene models with high sequence identity

    1. AT2G44830.1 [+] show detail - Protein kinase superfamily protein
      E-value: 0; Score: 783.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Protein kinase-like domain 6.1e-81
    ProfileScan Protein kinase, catalytic domain 43.552
    HMMPanther NONPHOTOTROPIC HYPOCOTYL PROTEIN 1(PHOTOTROPI 4.2e-249
    HMMPanther SERINE/THREONINE PROTEIN KINASE 4.2e-249
    Gene3D no description 5.7e-56
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMPfam Serine/threonine-protein kinase-like domain 1.9e-35
    HMMPfam Serine/threonine-protein kinase-like domain 5.9e-20
    HMMSmart Serine/threonine-protein kinase domain 4.8e-87
    HMMSmart Tyrosine-protein kinase, catalytic domain 1.1e-05

    See the detailed result >

    AT2G44830.1

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 114332 Blast hits to 86906 proteins in 3497 species: Archae - 36; Bacteria - 13769; Metazoa - 45842; Fungi - 12821; Plants - 20261; Viruses - 350; Other Eukaryotes - 21253 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR