K35028

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35028

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35028

Determination of introduced cDNA(s)

  • J033074L09 - Rice Full-length cDNAs - Original: J033074L09

    full reading [+] show sequence

    Nucleotide sequence: J033074L09 - full reading
    TGGGGAGACA GAGAGACTGA ACTGAGCTCA AGCCGCTCCG GGATCTCCAT 
    CTTGAGTTAT CCAAGAACTG AGAGTGCTCC CGGCTCCTAC ATTTGCCCTC
    TTTGGGCACC AATAATTGGA GGAGCAGGCT GTGGATTCTT GATTTCTTGG
    TGGCTGGAAT CCTTTCAATT ACAGACAAGT TGCAGGTTGC TTCAGGTTCT
    TGAAATTGTA ATTTGGTTGG TTGCCTGCGG TCCCTACTTC CTGGAGCTTT
    GCTTATTTCT AAGAATCTTT TAATGCTCAA AACTGCTTCA ATTTCATTAT
    TTTGGGAGAG TAATCACCTC AGTGGTTGAG CGCTGGTGAT GCTAAAGTTG
    GATGATGGAG GTAGCTGATA AGATTGTGGA GCCAAAGGGC CCTTTGGTGG
    CCACTGCTCA GCTGCCAAAT AATGTAGAGT TGCTCAAATC AGTTGTGCTG
    AATCCATCAA GGGAAGGGGG AAGCTCACAA GAGCAGTATG AGAAGGATCT
    GTTGGCAGAA GGTGAGGAGA GTTTTCGGAG CGAGGAGTCA TCTGACGAGG
    GTGGCCGGAG TTCATTCTCC GGGGTGAGCC ACCCTCCGGA GCCAATTGAT
    GTGGATCTTA TGAGCACGGT GTATGTCGCG ATCGACGAGG AGAAGCCTGA
    GCCACCCGAG TGCTTGATGC GAGGCCTATC GGTCAAAGGA GCATCTATGG
    AGGACCTCTC AGTCCATGCC ATGGATGCAA AGCCGGATGT GATTGTTTGC
    ACAGTTAATG TCAATGGTTT GGTTGAAGAG AGGAAGGTGC ACTGTGCTGT
    GGTAGCACCA GATGCTGTTG AAGCCGTATC CTCAACTCAG GCCTCGGAGG
    AGAAGGATTG CGTCTGGGAT GCCTCCTTCC CTCCCAGTGG CAATGTCAGC
    CCACACAGTA GCAGTGACAG CACTGGTGCG GTCGCTGCCA CAAGCATCAG
    GGGAAGATCC ACAAGCACAT GTAGAAGTGG AGTTCTAACT AGTGAATCCA
    TCCTTACCGT GGAGAAGACA TGTGAGAGCG CAAAGGATAG CACCCGAGGC
    AACTCAATGG AAAGCACAAA GACCAGCATG AGTCGAGCGA GTGATAGTAG
    TGGCGTTAGC GATGACAGCA ACTGGAGTAA CATCACAGGA AGTGCTAACA
    AGCCTCACAA GGGCAATGAT CCTAGATGGA GGGCTATTCT AGCTGTCCGG
    GGTCGGGGCA ATGTCCTTGG GATGAGCCAT TTTAGATTGC TCAAGCGTCT
    TGGCTGTGGT GACATTGGCA GCGTCTACCT CTCAGAGTTG AGTGGGACAA
    GGTGCTACTT TGCGATGAAA GTAATGGACA AGGCGTCCTT AGCAAGCCGA
    AAGAAGTTGA ACAGAGCTCA AACTGAAAGG GAAATTCTGC AGCTTTTGGA
    TCACCCATTC CTTCCAACTC TGTACACACA CTTTGAGACT GACAGGTTCT
    CATGTCTGGT CATGGAATTC TGTCCGGGTG GTGATCTGCA CACTCTGCGG
    CAACGGCAGC CACGAAAGCA TTTCTCTGAA TATGCAGCAA GGTTTTATGC
    CGCTGAGGTG CTCCTAGCTC TGGAGTACCT GCACATGCTG GGCGTCGTCT
    ACCGGGACCT GAAGCCGGAG AACGTCCTGG TGCGCGATGA CGGCCACATC
    ATGCTCTCCG ACTTCGACCT CTCTCTGCGG TGCGCGGTGT CGCCGACGCT
    CATCAGAGCG TCGGCGTCCG ACTCCGATCC CAGGAGAGCC GGCGGTTCGT
    TCTGCGTGCA GCCTGCTTGC ATGGAGCCTT CTTCGGTGTG CATCCAGCCG
    GCGTGCTTCA TGCCCAAGCT GTTCGGCCAG AGGAGCAAGA AGCAGGGCCG
    GAGGCCGAGG TCCGAGTTGG GGCAGGGCGG TGGCGCCGCC CTGCCGGAGC
    TCGTCGCCGA GCCGACGTCG GCGCGGTCAA TGTCCTTCGT GGGGACGCAC
    GAGTACCTGG CGCCGGAGAT CATCAAGGGG GAAGGCCACG GCAGCGCCGT
    GGACTGGTGG ACGTTCGGCA TCTTCCTCCA CGAGCTCCTC TACGGCAAGA
    CGCCGTTCAA GGGGTCGGGC AACCGCGCCA CGCTGTTCAA CGTGGTCGGG
    CAGCAGCTGC GGTTCCCGGA GTCGCCGTCG ACGAGCTACG CCGGGAGGGA
    CCTCATCAGG GGCCTCCTGG TGAAAGAGCC GCAGCAGCGG CTCGGCGTGA
    AGCGTGGCGC CGCCGAGATC AAGCAGCACC CCTTCTTCGA GGGCGTCAAC
    TGGGCGCTCA TCCGGTGCAG CACGCCTCCC GAGGTGCCCA GGCATGTCGA
    GGCCGAGCTG CCGGCCAAGT ACGGCGTGGC CGAGCCGGTG GCGAGCGGCG
    GCGGAGGCGG CAAGAGGGTG GTCGGCGCCG AGGTCAGGTC CGGCGGGAAA
    TACCTCGACT TCGAATTCTT TTAGATTATG AATGAGTTGC TGAATGCCCA
    GTCTCACTAG TGTGTGCATT TTAGGTGTGG TGTCTCATTG TAGTTTTGCA
    TGCAGTGTTC CTTCCTGGAT CAATGTAACC AGTGTTAGAT TTAGCGCGAT
    TTTAGTGCGC AATGTATCCA ACACTCTGGA ACCCAGGGAA AGAAATAAAT
    CAG

    Gene models with high sequence identity

    1. AT2G44830.1 [+] show detail - Protein kinase superfamily protein
      E-value: 0; Score: 783.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Protein kinase-like domain 6.1e-81
    ProfileScan Protein kinase, catalytic domain 43.552
    HMMPanther NONPHOTOTROPIC HYPOCOTYL PROTEIN 1(PHOTOTROPI 4.2e-249
    HMMPanther SERINE/THREONINE PROTEIN KINASE 4.2e-249
    Gene3D no description 5.7e-56
    PatternScan Serine/threonine-protein kinase, active site 0
    HMMPfam Serine/threonine-protein kinase-like domain 1.9e-35
    HMMPfam Serine/threonine-protein kinase-like domain 5.9e-20
    HMMSmart Serine/threonine-protein kinase domain 4.8e-87
    HMMSmart Tyrosine-protein kinase, catalytic domain 0.000011

    See the detailed result >

    AT2G44830.1

    Model type
    Protein coding
    Short Description
    Protein kinase superfamily protein
    Computational Description
    Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane, nucleus; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: D6 protein kinase like 2 (TAIR:AT5G47750.1); Has 114332 Blast hits to 86906 proteins in 3497 species: Archae - 36; Bacteria - 13769; Metazoa - 45842; Fungi - 12821; Plants - 20261; Viruses - 350; Other Eukaryotes - 21253 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR