K35406

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35406

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35406

Determination of introduced cDNA(s)

J023099B20 - Rice Full-length cDNAs - Original: J023099B20

full reading [+] show sequence

GATTTCGGTG CTTAACCAAA CTCACCATAA TATCAGTTCA TCCACAACAA 
TGTCGGCCTA CTGCGGCAAG TACAAAGATG AGCTCATAAA GAATGCTGCC 
TACATTGGCA CCCCGGGCAA GGGTATCCTC GCTGCGGACG AGTCCACTGG 
CACCATCGGC AAGCGCTTCG CCAGCATCAA TGTTGAGAAC GTCGAGGATA 
ACCGCCGTGC CTTCCGCGAG CTCCTCTTCT GCACCCCTGG CGCCCTCCAG 
TACATCAGCG GCGTGATCCT CTTCGACGAG ACCCTCTACC AGAAGACCAA 
GGATGGCAAG CCCTTCGTCG ATGTCCTCAA GGAGGCCGGT GCCCTCCCCG 
GCATCAAGGT GGACAAGGGC ACCATCGAGG TCGCCGGCAC CGACAAGGAG 
ACCACCACCC AGGGCCACGA TGACCTCGGC AAGCAATGCG CCAAGTACTA 
CGAGGCCGGT GCCCGCTTCG CCAAGTGGCG TGCCGTCCTC AAGATCGGAC 
CCAACCAGCC CTCCCAGCTT GCCATTGATC TGAACGCCCA GGGCCTTGCT 
TGCTACGCCA TCATCTGCCA GGAGAACGGG CTGGTGCCGA TCGTCGAGCC 
GGAGATCCTC GTCGATGGCC CTCACGACAT CGATCGATGC GCGTACGTCT 
CCGAGGTGGT CCTCGCCGCG TGCTACAAGG CGCTGAACGA GCACCATGTC 
CTCCTCGAGG GCACCCTCCT GAAGCCCAAC ATGGTCACCC CGGGTTCCGA 
CGCCAAGAAG GTGGCGCCGG AGGTCATCGC GGAGTACACC GTCCGCACCC 
TCCAGAGGAC CGTCCCTCCT GCTGTGCCGG CCATCGTCTT CCTCTCCGGT 
GGACAGAGCG AGGAGGAGGC GACGCTGAAC CTGAACGCCA TGAACAAGCT 
CAGCGCCAAG AAGCCGTGGT CGCTGTCCTT CTCCTTTGGC CGTGCCCTGC 
AGCAGAGCAC GCTCAAGGCC TGGGCTGGCA AGACGGAGAA CGTAGAGAAG 
GCCAGGGCGG CCTTCCTCGT CAGGTGCAAG GCCAACTCCG AGGCTACCCT 
GGGTACTTAC AAGGGTGATG CTGTCCTCGG CGAGGGCGCT GCTGAAAGCC 
TGCACGTCAA GGACTACAAG TACTGATCTG CATCAGGCGC TGGCCTGCTA 
TGGCTTGGCT ACCTGATCGA TTTCCCATTC TGGGGCCGTT ACATAATGCG 
GTTTTGATAT CTAGAGGCTC TAACAGGATT CACAATTTCG GATCGGAATT 
TCAGAATTTT TCCCTTTCCG ATAGATCGAA CCCTGGAGCA CAATATATCT 
GTGGTTATCT AAAAGCCTTG TCTTAATAAT CCAGAACCTT TTTTTTTCTT 
GTAAAATATT TGCTGATGAA CATCAGCTGG CCCGGAGTTT TTATTTTTAT 
CAATCACTTT GTAACTGTCT GATTTGCCCG GTGCTGTGTG ATTTTGTTGA 
ATGAAATTAA CTTCACTTCT TTGAGTTT

Gene models with high sequence identity

AT2G36460.1 [+] show detail - Aldolase superfamily protein
E-value: 2e-167; Score: 585.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	Fructose-bisphosphate aldolase, class-I	2.3e-269
superfamily	Aldolase	6.9e-159
HMMPfam	Fructose-bisphosphate aldolase, class-I	4e-168
Gene3D	Aldolase-type TIM barrel	1.8e-145
PatternScan	Fructose-bisphosphate aldolase, class-I	0

See the detailed result >

AT2G36460.1

Model type: Protein coding
Short Description: Aldolase superfamily protein
Computational Description: Aldolase superfamily protein; FUNCTIONS IN: copper ion binding; INVOLVED IN: response to cadmium ion, response to salt stress, pentose-phosphate shunt; LOCATED IN: mitochondrion, plasma membrane, membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: Aldolase superfamily protein (TAIR:AT3G52930.1); Has 5036 Blast hits to 5030 proteins in 977 species: Archae - 0; Bacteria - 714; Metazoa - 1434; Fungi - 8; Plants - 477; Viruses - 0; Other Eukaryotes - 2403 (source: NCBI BLink).
Link: InterPro Scan - TAIR