K35410

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35410

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35410

Determination of introduced cDNA(s)

  • J013000K19 - Rice Full-length cDNAs - Original: J013000K19

    full reading [+] show sequence

    Nucleotide sequence: J013000K19 - full reading 
    TGGGGACAAC TACTATCACT AAATATCTAG CATCCTTATC CTCTTCTTTG 
    TCTCTTTCCC TTCCTTCTCC CTTCTCTCTC TCTCTCTGAC TACCAGCACG 
    AAGATGACGA TGGTGGCTAG CTGTGCGGGG TGGCGCGTTG GGCGTGGAGG 
    ACGCTCGTCG GAGCCAGTGC CCGCCGTTGT CCCCGTCGCC GTCGCCCCAC 
    CGCCGCGGGG TCGAGGCGAC GACGAGGAGC TCGGCGATAG GTGCGGTGAA 
    TAAGAGGGAG AGTGGGAGCG GGACGTGGAG GCCGCTGCTG GCGCCGGGGA 
    CGGCGTTGCC GGGCGGGAGC TTCTCCTGTC GGCTCAAGAC CTCGGCCGCC 
    GAGGAGGACG ACGACGGCGC GGCCCCGGCA AGGGTCGCCC TCAAGCTCGC 
    CTCCCTTACC GCGCTGCTCT GGCTCCCCGC CCTCGTTGGT CTTCTCATCG 
    GCTGCCCCAC CTTGACGACC ATCGGATTCG CCGCTGCCTC CTCCTCCACA 
    CTCCGCCTCG CCGACCACCA GATTCGCCGC CGCCTCCTCC TCCTGCTCCA 
    CCACGTGGCT GCCTTCTCCT CTCTCTCTCT CTCTCCTTCT CCTCCTCCAA 
    GTTACCAGGT ACCAGGTATC ACGGATACCA GGTACAAGGT ATTAGGTATC 
    ATGGTACCAG ATACCAGGTA CCAGCCGGTA CCAGATTTCA GGTATCAAAG 
    GTATCAGTCG GTACCAAAGG TACCAAGCAC CAGGTACCAA CTGATACCCA 
    AGGTACTAGG TATCAAGATG GAGTGCACGT GGAAGCGGAG AGGAGTCACT 
    TAAATTATCC CGTTACAACG GGATCCCGTT TTGTAGCCGC TCTCATAAAT 
    ATATTATAAT TATAACCAGT CTCTTATAGT TGGATTACCC ACCATGGATT 
    AGTCTCTTGT AGTTGGATTA TTCCCCCACC ATGGATTAGG GTGATTAAAC 
    CGGACCTCTT GTTGTGCAGG CAGTAAAAGG TGGTTGTGTG CTTGTTGTGA 
    CACAACATTT ACCCCCAAAT TTAGCTCTCA TTTGAGCTCG TCAGCTAATT 
    GAATATGTGA AGATCAAGTT GCTGCAGTTG ATGATTTTGA ATTATGGATC 
    ATTCAATCAT GGGAAAGAGA CAAAGAATGG TACACTGGTA ATGATCGGAC 
    TTTGAGCCGA TTTATATATG AGGATCATTT AAACATGGGA AAGAGCCAAA 
    GAATGGTAAG CTGGTACTAA TCGGATTTTG TGAGTCAATT TATATATGAA 
    AATTTCTGCA GTGGACAAAA CACTTGGTAC TGCTGTCATA GGAGTCCTAG 
    AGGCCTTCAA GAGCATGGTT TCTGGTCAGC ACGGTAGATT TCATAGAGTT 
    GTGGTGCAGA ACATTCTGAA AAACCTATGT GCCTATGCCA AACCAGACAG 
    TGACTGCCAA TACTCCATGC AGAAATTTTC TGTAGACAAC ATCTCGATGG 
    CACTTAGAAC TATGTATCAG ACAGACAATC TTATAGGGGA GGACATGGAG 
    GCCTTTCTTG GCCTTGTTTT GCAGTTCAGC AAACTTCTCT GTGAGACCGA 
    TTTCATCGAG GCTGTCAACG GAAATGGAAT CGGCTTAAGG AATTTTGTAC 
    AGAAGCTGAA ATTAATCCTG AAGCAAGCAA ATTCACATAG AACTGAAGCA 
    AGCGTACACC CTGGAATCAG AAGATCCGCA ATTGAGCAGG TCATATGGAT 
    GGCGCAACTG AAGCCTGAAC CTCACTGCAT CGACCATTTC ATCGACTGCT 
    AAATGCGGGA CGATCTGGTG ATGGCGCAGC AGACAGCCAG AAGGGCATGG 
    CAAGAGAATT TCAAGCTTTC ATCTGGAGGC GTCTCTGTCC TGGAGTACGA 
    AGAGTCCCTT CGCTCTGTTG CCTCGAGGGC ACTGAAGCTG ATCCTCGGTG 
    TAGGGATGAA AACGGTCGGA AACGGTCGGA AAAACCCTCT ACCATTTCCA 
    TTTTCATTTT ATTTTCTCGA AAATGGAATC GGAATGGCAT ACTCGGC

    Gene models with high sequence identity

    1. AT3G06210.1 [+] show detail - ARM repeat superfamily protein
      E-value: 0.00000003; Score: 57.80

     

    InterPro Scan Digest

    See the detailed result >

    AT3G06210.1

    Model type
    Protein coding
    Short Description
    ARM repeat superfamily protein
    Computational Description
    ARM repeat superfamily protein; FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Armadillo-like helical (InterPro:IPR011989), Armadillo (InterPro:IPR000225), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARM repeat superfamily protein (TAIR:AT5G18980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR