K35418

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35418

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35418

Determination of introduced cDNA(s)

  • J023011P12 - Rice Full-length cDNAs - Original: J023011P12

    full reading [+] show sequence

    Nucleotide sequence: J023011P12 - full reading
    GGCCCCCACG ACGCTCGCTC TCTCCTCTCT CTCCCTCTTC CGCCGCCGCG 
    CTTGGGGAAG GAAGGAGAAA GCAAGCCATC GGCCCCCGCC TCCGCCTCCG
    AAGGGACATT GTTGCTAGTT GGTGATGGCT GAGCAGGCTA ATCAACCGAC
    TGTCCTTCAG AAGTTCGGTG GCCAGTTCCA CCTTGGCTCC AGCTTTTCTG
    AAGGTGTACG GGCTCGTAAC ATCTGCCCAT CTGTCTCATC CTATGACAGG
    CGCTTTACCA CAAGGAGCTA CATGACCCAG GGCCTTGTCA ATGGTGGCAT
    CAACGTCCCA ATGATGTCGT CCTCTCCAAT TTTTGCTAAT GCTCCAGCTG
    AGAAAGGTGG CAAAAACTTC ATGATTGATT TCCTCATGGG TGGAGTGTCA
    GCCGCAGTTT CAAAGACTGC TGCTGCTCCG ATTGAGCGTG TGAAGCTGCT
    TATCCAGAAC CAGGATGAAA TGATCAAGGC TGGTAGGCTC TCAGAGCCAT
    ACAAGGGTAT TGGGGACTGC TTCGGACGCA CTATCAAGGA TGAGGGTTTT
    GCTTCATTGT GGAGAGGAAA CACTGCCAAT GTGATCCGTT ACTTCCCCAC
    CCAGGCTTTG AACTTTGCTT TCAAGGATTA CTTCAAGAGG CTGTTCAACT
    TCAAGAAAGA CAAGGATGGT TACTGGAAGT GGTTTGGTGG CAACCTTGCC
    TCTGGTGGTG CTGCTGGTGC TTCATCTCTG TTTTTTGTGT ACTCCCTTGA
    CTATGCTAGG ACAAGGTTGG CCAATGATGC GAAGGCTGCC AAGGGAGGAG
    GTGAAAGGCA GTTCAATGGC CTTGTGGATG TTTACCGCAA GACTCTCAAG
    TCAGATGGCA TTGCTGGGTT GTACCGTGGA TTTAACATCT CATGTGTTGA
    AATCATTGTC TACCGTGGTC TGTACTTTGG AATGTATGAT TCTCTGAAGC
    CAGTTGTACT CACTGGGTCT CTCCAGGACA ATTTCTTTGC AAGCTTTGCC
    CTTGGGTGGC TGATCACCAA CGGTGCAGGT CTTGCCTCTT ACCCCATTGA
    TACCGTCCGC AGAAGGATGA TGATGACCTC TGGAGAGGCT GTCAAGTACA
    AGAGCTCCAT GGATGCTTTC TCCCAGATCC TGAAGAACGA GGGTGCCAAG
    TCACTGTTCA AGGGTGCTGG TGCCAACATC CTACGTGCCA TTGCTGGTGC
    TGGTGTGCTC TCAGGCTATG ACCAGCTGCA GATCCTCTTC TTTGGAAAGA
    AGTACGGCTC GGGCGGTGCC TAAACTGGCA GAAAATGATG ACGAACAAGT
    GTTTATTCCT GGTCCTGCAC TAACGGGATC TGGTGAATTT TGCCTTTTTA
    ACATTGAAAA CAATAATAAT TCTTGTAGGG GAGAACACTC CCCGACATTC
    GTTTTTTGGT GGAAGCGTTT ATCTCCAAAC ATTGTCATAG GCGGAGGCGT
    TAATCGCAAA CAGTTTACCA TCATAGGGTT GAGTTTGAGT TGAGTCTGGC
    CGGCTCTGTT ATGTCTGGCG ATTTTCCTAC CATACATTAC CCTCGGTGAA
    ATATCGAAAG ATTATTGAGT TGCTGTC

    Gene models with high sequence identity

    1. AT3G08580.2 [+] show detail - ADP/ATP carrier 1
      E-value: 3e-164; Score: 575.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Mitochondrial substrate/solute carrier 1.5e-24
    HMMPfam Mitochondrial substrate/solute carrier 2e-20
    HMMPfam Mitochondrial substrate/solute carrier 1.1e-16
    superfamily Mitochondrial substrate carrier 4.9e-80
    HMMPanther ADP,ATP CARRIER PROTEIN 4.5e-188
    HMMPanther Mitochondrial substrate carrier 4.5e-188
    ProfileScan Mitochondrial substrate/solute carrier 25.86
    ProfileScan Mitochondrial substrate/solute carrier 22.406
    ProfileScan Mitochondrial substrate/solute carrier 19.038
    FPrintScan Mitochondrial carrier protein 8.9e-67
    FPrintScan Mitochondrial carrier protein 8.9e-67
    FPrintScan Mitochondrial carrier protein 8.9e-67
    FPrintScan Mitochondrial carrier protein 8.9e-67
    FPrintScan Mitochondrial carrier protein 8.9e-67
    FPrintScan Mitochondrial carrier protein 8.9e-67
    FPrintScan Adenine nucleotide translocator 1 2.7e-66
    FPrintScan Adenine nucleotide translocator 1 2.7e-66
    FPrintScan Adenine nucleotide translocator 1 2.7e-66
    FPrintScan Adenine nucleotide translocator 1 2.7e-66
    FPrintScan Adenine nucleotide translocator 1 2.7e-66
    FPrintScan Adenine nucleotide translocator 1 2.7e-66
    FPrintScan Adenine nucleotide translocator 1 2.7e-66

    See the detailed result >

    AT3G08580.2

    Model type
    Protein coding
    Short Description
    ADP/ATP carrier 1
    Curator Summary
    mitochondrial ADP/ATP carrier
    Computational Description
    ADP/ATP carrier 1 (AAC1); FUNCTIONS IN: binding, copper ion binding, ATP:ADP antiporter activity; INVOLVED IN: transport, purine nucleotide transport; LOCATED IN: in 10 components; EXPRESSED IN: 28 plant structures; EXPRESSED DURING: 16 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108), Adenine nucleotide translocator 1 (InterPro:IPR002113); BEST Arabidopsis thaliana protein match is: ADP/ATP carrier 2 (TAIR:AT5G13490.2); Has 19858 Blast hits to 12534 proteins in 484 species: Archae - 0; Bacteria - 0; Metazoa - 8967; Fungi - 5060; Plants - 3882; Viruses - 0; Other Eukaryotes - 1949 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR