K35503

RIKEN rice full-length cDNA overexpressed Arabidopsis lines

Original: K35503

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: K35503

Determination of introduced cDNA(s)

J023028O11 - Rice Full-length cDNAs - Original: J023028O11

full reading [+] show sequence

GAGAAGAGGA GAGGCCTCTG CTTCCTCTCC AATCTCAGGA TGTAGGTTCA 
GAATACACAA GGGATGGTTC AGTTGACATC AACAAGGAGC CAGCCCTGAA 
GCACAGCACA GGGAACTGGA GGGCGTGCTT CTTGATTTTA GGTGTTGAAT 
TTTGTGAAAA CATGACCTAC TTTGTAATCT CGAGGAATCT AGTCACATTC 
CTCACCACTG TGCTCCACGA AAGCAAGGTC GATGCTGCCA GAAATGTCTC 
TGCCTGGGTT GGAGCTTGCT TCCTCACACC GGTTGTTGGT GCCTTTCTGG 
CAGACACTTA TTGGGGCAGA TACTGGACAA TTGTTGTTTT CCTCCCGGTG 
TACATCACTG GAATGCTCAT CGTGACAGTT TCAGCATCAC TTCCAATGTT 
CTTGACATCT TCTGAACATG GCAATGTTCA TCGTTCCGTA GTGTATCTAG 
GGCTCTATCT TGCTGCCCTT GGGAGTGGTG CAATGAAACC ATGCACTTCA 
TCCTTTGGGG CCGACCAGTT TGATAGCACT GATCTGGAGG AGTTACCGAA 
GAAGGCCTCC TTCTTCAGTT GGTCCTTCTA CATGACTACT GTCAGCACCT 
TGCTGTCAAG CACAGTGCTT GTTTGGTTGC AAGACAATGT TGGATGGGGG 
GTGGGTTGCG CAATCCCGAC TGTGTTCATG ATCATCAGTT TCCCTGTATT 
CATTGCCGGC TCAAGAGTTT ACAGGTTTAG GAACCTGGGA TTTAGCCCCC 
TCAAGAGCCT CTGTCAGGTG ATTGTTGCAG CTGTTAGGAA GTGCCATCTG 
CAATTGCCAG AAAATAAGTC ACTTTTATAT GAGCCATCCA ATTCATCTTC 
AACAACTGAA GCAAGTCATA AAATTCAGCC CACCAATCAA TTCAGGTTCC 
TTGACAAGGC AGCCATTGTA CTGCCCCCAT CAGACGAAAC GTGCATCAAG 
CCCATGAGCT CATGGTCGCT CTGCACAGTG ACACAAGTTG AGGAGCTGAA 
GATGCTGCTG CGGATGTTCC CCACCTGGGC ATCTTTCGTG ATCTTTTTCG 
CGGTCAATGG GCAGATGTCC TCAACGTTCA TTGAGCAGGG AATGGCCATG 
GACAACCATG TTGGTTCATT TGCAATCCCA CCTGCATCCC TCACCATCAT 
CGCCGTGCTC AGCGTCCTTG TCTTGGTTCC TGTGTATGAG ATCGTATCAG 
TGCCACTGGT GAAGCATTTC ACCGGACAGG ACAAAGGCTT CTCACATGCG 
CAGCGCATCG GAATCGGCCT TTCACTGTCC ATGATCATGA TGGTGTACGC 
AGCATTGCTC GAGATGAAGC GGCTGGCAAT CGTGCAATCA AGTGGCTTAG 
CAGACCACAA TGTAGCTGCT CCAATGAGTA TCCTGTGGCA GACACCAGCA 
TACTTTCTGC AAGGGGTTTC AGAGATTTTC AGCTGCATCG GTATGTCACA 
GTTCTTCTAT GACCAGGCGC CAGACAGCAT GAAGAGCGTT TGCGCAGCGC 
TTGGGCAGCT CGCAATCGCT TCAGGAGCTT ACTTCAACAC GTTCGTGCTT 
GGCGCTGTCG CAGTGATCAC GACGAGCAGT GGAGCACCTG GGTGGATTCC 
GGATAATCTG AATGAGGGCC ATCTGGACTA TTTCTTCTGG ATGATGGCCA 
CCCTTAGCTT ACTTAATCTT GCCATGTTTG TGTATTCTTC CACGAGGCAC 
AGAGAGAACA CAGCTTCATG ACCAGATTTA TACATAAGAC ATGAAGCACC 
AACGAAATCT AGAGGGTTAT CATAACATCA ACGAGTTATA CAAGAGAGAT 
ACAATTATCA TTTTAATGAA TTGGCCTATA AAATCTAGAG GGAATCTC

Gene models with high sequence identity

AT2G02040.1 [+] show detail - peptide transporter 2
E-value: 8e-151; Score: 531.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Oligopeptide transporter	3.4e-76
HMMPanther	OLIGOPEPTIDE TRANSPORTER-RELATED	1.4e-288
HMMPanther	OLIGOPEPTIDE TRANSPORTER-RELATED	1.4e-288
superfamily	Major facilitator superfamily, general substrate transporter	5.2e-22

See the detailed result >

AT2G02040.1

Model type: Protein coding
Short Description: peptide transporter 2
Curator Summary: Encodes a di- and tri-peptide transporter that recognizes a variety of different amino acid combinations. Expression of the transcripts for this gene can be detected in the embryo through in situ hybridization. This protein does not have nitrate transporter activity based on oocyte transport assays.
Computational Description: peptide transporter 2 (PTR2); FUNCTIONS IN: dipeptide transporter activity, high affinity oligopeptide transporter activity, tripeptide transporter activity, peptide transporter activity, transporter activity; INVOLVED IN: dipeptide transport, tripeptide transport, peptide transport; LOCATED IN: vacuolar membrane, plasma membrane, vacuole, plant-type vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G62200.1); Has 8080 Blast hits to 7668 proteins in 1494 species: Archae - 0; Bacteria - 3960; Metazoa - 799; Fungi - 488; Plants - 2224; Viruses - 0; Other Eukaryotes - 609 (source: NCBI BLink).
Link: InterPro Scan - TAIR